RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
RPUSD4-207ENST00000532800 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 HHLA1C9JL84 531 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 CYP26A1O43174 497 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 GREM1O60565 184 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TRIM49P0CI25 452 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TRIM49CP0CI26 452 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 NOVA1P51513 510 aaKnown RBP18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 IRX4P78413 519 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 MAP7D1Q3KQU3 841 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 C10orf76Q5T2E6 689 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 CLEC20AQ6ZU45 233 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TMEFF1Q8IYR6 380 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 ZNF513Q8N8E2 541 aaPredicted RBP18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TERB1Q8NA31 727 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TAF4BQ92750 862 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 SPACA7Q96KW9 195 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 KLF16Q9BXK1 252 aaPredicted RBP18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 APOBEC3GQ9HC16 384 aaKnown RBP18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 TLR8Q9NR97 1041 aaKnown RBP18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
RPUSD4-207ENST00000532800 ZFHX4Q86UP3 3567 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 ATXN2Q99700 1313 aaKnown RBP18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 CEP192Q8TEP8 1941 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 CDX4O14627 284 aaPredicted RBP18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 IKBKBO14920 756 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 MDM4O15151 490 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 CMA1P23946 247 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 WASP42768 502 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 PTGER3P43115 390 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 VAMP7P51809 220 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 SHC2P98077 582 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 INCA1Q0VD86 236 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 LPCAT2Q7L5N7 544 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 PGBD3Q8N328 593 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 NMUR1Q9HB89 426 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 TMEM9BQ9NQ34 198 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 CYLDQ9NQC7 956 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 NUDT5Q9UKK9 219 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 TRAF3IP3Q9Y228 551 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 GON4LQ3T8J9 2241 aa18.04■□□□□ 0.48
RPUSD4-207ENST00000532800 NEDD8-MDP1E9PL57 170 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 CALUO43852 315 aaPredicted RBP18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 ACO1P21399 889 aaKnown RBP18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 GCLMP48507 274 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 PPP3CAQ08209 521 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 DAB2IPQ5VWQ8 1189 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 EGFLAMQ63HQ2 1017 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 HTR3DQ70Z44 454 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 TAS1R2Q8TE23 839 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 ERLEC1Q96DZ1 483 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 MMRN2Q9H8L6 949 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 TMEM74BQ9NUR3 256 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 DNAJC17Q9NVM6 304 aaKnown RBP18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 USP25Q9UHP3 1055 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 MAPK8IP1Q9UQF2 711 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 SCML2Q9UQR0 700 aa18.03■□□□□ 0.48
RPUSD4-207ENST00000532800 CEP295Q9C0D2 2601 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 PI4KAP42356 2102 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 CFAP47Q6ZTR5 3102 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 A0A1W2PQH9 124 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 MAP3K13O43283 966 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 MYL1P05976 194 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 HOXB2P14652 356 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 GABRG2P18507 467 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 CD58P19256 250 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 NR2F2P24468 414 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 SYKP43405 635 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 NDUFA8P51970 172 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 TRIM61Q5EBN2 209 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 SH3PXD2AQ5TCZ1 1133 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 GRAMD4Q6IC98 578 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 TPGS1Q6ZTW0 290 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 TOGARAM2Q6ZUX3 1019 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 CYFIP2Q96F07 1278 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 SPATA32Q96LK8 384 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 ACOX2Q99424 681 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 NT5C1AQ9BXI3 368 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 ZDHHC9Q9Y397 364 aa18.02■□□□□ 0.48
RPUSD4-207ENST00000532800 ASCC3Q8N3C0 2202 aaKnown RBP18.02■□□□□ 0.47
RPUSD4-207ENST00000532800 A0A1W2PQF6 199 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 MAPK13O15264 365 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 CACNG3O60359 315 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 RHOBTB3O94955 611 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 RARGP13631 454 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 TYRP14679 529 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 ZNF252P-AS1Q0IIN9 211 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 DPYDQ12882 1025 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 UAP1L1Q3KQV9 507 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 PREPLQ4J6C6 727 aaPredicted RBP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 TRMT11Q7Z4G4 463 aaKnown RBP18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 FAM186BQ8IYM0 893 aa18.01■□□□□ 0.47
RPUSD4-207ENST00000532800 DEFB119Q8N690 84 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms