RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TMEM110Q86TL2 294 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 ADGRG2Q8IZP9 1017 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 ANKRD20A12PQ8NF67 263 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 FLCNQ8NFG4 579 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 CLEC4CQ8WTT0 213 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 SHDQ96IW2 340 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 LHX5Q9H2C1 402 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 EBF3Q9H4W6 596 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 LTB4R2Q9NPC1 389 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 CFAP97Q9P2B7 532 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 RAPGEFL1Q9UHV5 662 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 PIAS3Q9Y6X2 628 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 CACNA1IQ9P0X4 2223 aa14.64□□□□□ -0.07
TSPAN4-220ENST00000532375 E2F8A0AVK6 867 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 PIK3R2O00459 728 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 PAPSS1O43252 624 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 MED7O43513 233 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 CAVIN2O95810 425 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 LCP1P13796 627 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 TARSP26639 723 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 YWHAGP61981 247 aaKnown RBP eCLIP14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 RAPGEF1Q13905 1077 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 PDGFRLQ15198 375 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 ITPRIPL2Q3MIP1 535 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 BSPRYQ5W0U4 402 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 PJA1Q8NG27 643 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 TTC8Q8TAM2 541 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 CLDN23Q96B33 292 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 OSBPL6Q9BZF3 934 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 MFSD1Q9H3U5 465 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 NLRC4Q9NPP4 1024 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 DUS2Q9NX74 493 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 TJP2Q9UDY2 1190 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 DAAM1Q9Y4D1 1078 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 WDFY4Q6ZS81 3184 aa14.63□□□□□ -0.07
TSPAN4-220ENST00000532375 SPECC1L-ADORA2AF8WAN1 911 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 SCAMP3O14828 347 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 KLKB1P03952 638 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 TPM2P07951 284 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 CHRNB2P17787 502 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 CTHP32929 405 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 CDH5P33151 784 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 BPIFB4P59827 614 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 ZNF852Q6ZMS4 543 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 HTR3DQ70Z44 454 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 NOP9Q86U38 636 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 RALGPS2Q86X27 583 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 SUGP1Q8IWZ8 645 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 SCUBE3Q8IX30 993 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 ARHGAP18Q8N392 663 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 EPS8L1Q8TE68 723 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 IRGQQ8WZA9 623 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 C8orf33Q9H7E9 229 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 ECT2Q9H8V3 914 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 DNMT3LQ9UJW3 386 aa14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 NOCTQ9UK39 431 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-220ENST00000532375 ATG2BQ96BY7 2078 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 FAM170BA6NMN3 283 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 MAN2B1O00754 1011 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 RALAP11233 206 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 GJA4P35212 333 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 SOX5P35711 763 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 PBX1P40424 430 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 PDCLQ13371 301 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 C10orf120Q5SQS8 335 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 NAIF1Q69YI7 327 aaPredicted RBP14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 CC2D1AQ6P1N0 951 aaPredicted RBP14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 RHBDF2Q6PJF5 856 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 Q6ZNB5 142 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 PASD1Q8IV76 773 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 BBS7Q8IWZ6 715 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 SIX6OS1Q8N1H7 587 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 FAM3CQ92520 227 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 BAP1Q92560 729 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 P2RY11Q96G91 374 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 PIWIL1Q96J94 861 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 NELL2Q99435 816 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 FBRSL1Q9HCM7 1045 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 SIT1Q9Y3P8 196 aa14.61□□□□□ -0.07
TSPAN4-220ENST00000532375 A0A1W2PQC6 194 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 E5RJQ4 531 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 STC2O76061 302 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 GFPT2O94808 682 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 FBXO21O94952 628 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 CYP17A1P05093 508 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 DCNP07585 359 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 CHRNB1P11230 501 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 COL9A1P20849 921 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 ACADSBP45954 432 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 IFNAR2P48551 515 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 KPNA1P52294 538 aaPredicted RBP14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 FANCCQ00597 558 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 EFEMP1Q12805 493 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 PTPN20Q4JDL3 420 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 MSANTD2Q6P1R3 559 aa14.6□□□□□ -0.07
TSPAN4-220ENST00000532375 LRSAM1Q6UWE0 723 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms