RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 MTMR12Q9C0I1 747 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 ZHX3Q9H4I2 956 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 RBAKQ9NYW8 714 aaPredicted RBP8.29□□□□□ -1.08
NXF1-212ENST00000531872 MARK1Q9P0L2 795 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 SH3BP1Q9Y3L3 701 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 NME7Q9Y5B8 376 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 ATMQ13315 3056 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 MGAQ8IWI9 3026 aa8.29□□□□□ -1.08
NXF1-212ENST00000531872 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 KCNJ18B7U540 433 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 WASH3PC4AMC7 463 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 PLK4O00444 970 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 TLX3O43711 291 aaPredicted RBP8.28□□□□□ -1.08
NXF1-212ENST00000531872 GREM1O60565 184 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 IGLV3-19P01714 112 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 KRT18P05783 430 aaKnown RBP8.28□□□□□ -1.08
NXF1-212ENST00000531872 PDGFRBP09619 1106 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 CISD3P0C7P0 127 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 ZDHHC11BP0C7U3 371 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 HLA-EP13747 358 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 GARTP22102 1010 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 YWHAQP27348 245 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 TUBP50607 506 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 ZNF132P52740 706 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 KCNA1Q09470 495 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 RILPL1Q5EBL4 403 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 HECTD3Q5T447 861 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 LARP1BQ659C4 914 aaKnown RBP8.28□□□□□ -1.08
NXF1-212ENST00000531872 HTR3DQ70Z44 454 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 TMPRSS12Q86WS5 348 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 NUP93Q8N1F7 819 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 FAM184AQ8NB25 1140 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 SCFD1Q8WVM8 642 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 RAD54LQ92698 747 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 CALML4Q96GE6 196 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 HPDLQ96IR7 371 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 XPO6Q96QU8 1125 aaKnown RBP8.28□□□□□ -1.08
NXF1-212ENST00000531872 MKRN2Q9H000 416 aaKnown RBP8.28□□□□□ -1.08
NXF1-212ENST00000531872 MIR1-1HGQ9H1L0 117 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 PDE11AQ9HCR9 933 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 IL37Q9NZH6 218 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.28□□□□□ -1.08
NXF1-212ENST00000531872 LIMCH1Q9UPQ0 1083 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 MYO18BQ8IUG5 2567 aa8.28□□□□□ -1.08
NXF1-212ENST00000531872 MUC22E2RYF6 1773 aaPredicted RBP8.27□□□□□ -1.08
NXF1-212ENST00000531872 A0A1B0GVT2 93 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 FAM92AA1XBS5 289 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 J3QKU1 62 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 PAPSS1O43252 624 aaPredicted RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 PCDHGA12O60330 932 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TACC1O75410 805 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 RTN3O95197 1032 aaPredicted RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 FAM163BP0C2L3 166 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TMEM191BP0C7N4 346 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TYRP14679 529 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 OXTRP30559 389 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 UBA7P41226 1012 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 GRK6P43250 576 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TPMTP51580 245 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 ENPP2Q13822 863 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 FUT11Q495W5 492 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 L1TD1Q5T7N2 865 aaKnown RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 PCSK4Q6UW60 755 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 DHRS13Q6UX07 377 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 SFR1Q86XK3 245 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 OR5B17Q8NGF7 314 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 LARP4BQ92615 738 aaKnown RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 FBXO32Q969P5 355 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 NXPE2Q96DL1 559 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 ANKRD36BP1Q96IX9 119 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 FCRL3Q96P31 734 aaPredicted RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 BBS2Q9BXC9 721 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TRIM9Q9C026 710 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 ZNF518BQ9C0D4 1074 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 ELOVL4Q9GZR5 314 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 OSGEPQ9NPF4 335 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 INTS13Q9NVM9 706 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 GMIPQ9P107 970 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 WDR35Q9P2L0 1181 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 EIF2B4Q9UI10 523 aaKnown RBP8.27□□□□□ -1.09
NXF1-212ENST00000531872 FBXO10Q9UK96 956 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 EXOC7Q9UPT5 735 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 STON1Q9Y6Q2 735 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 PTPRJQ12913 1337 aa8.27□□□□□ -1.09
NXF1-212ENST00000531872 TEX51A0A1B0GUA7 166 aa8.26□□□□□ -1.09
NXF1-212ENST00000531872 GOLGA8IPA6NC78 632 aa8.26□□□□□ -1.09
NXF1-212ENST00000531872 CAPN8A6NHC0 703 aa8.26□□□□□ -1.09
NXF1-212ENST00000531872 GOLGA8JA6NMD2 632 aa8.26□□□□□ -1.09
NXF1-212ENST00000531872 CLDN5O00501 218 aa8.26□□□□□ -1.09
NXF1-212ENST00000531872 CAPN9O14815 690 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms