RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 C10orf76Q5T2E6 689 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 GPRIN1Q7Z2K8 1008 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TMEFF1Q8IYR6 380 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TWNKQ96RR1 684 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 HNRNPABQ99729 332 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TMEM9BQ9NQ34 198 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 HCN2Q9UL51 889 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 SCML2Q9UQR0 700 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 HPSEQ9Y251 543 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 ZNF638Q14966 1978 aaKnown RBP13.52□□□□□ -0.24
TM9SF1-211ENST00000531406 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.24
TM9SF1-211ENST00000531406 HHLA1C9JL84 531 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CDX4O14627 284 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 GIPC1O14908 333 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 MAPK13O15264 365 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CYP26A1O43174 497 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 TRIM21P19474 475 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 PTGER3P43115 390 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 NOVA1P51513 510 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 VAMP7P51809 220 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 KRT85P78386 507 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 INCA1Q0VD86 236 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 NUDT18Q6ZVK8 323 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 ARMCX6Q7L4S7 300 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 TRMT11Q7Z4G4 463 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 PGBD3Q8N328 593 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 NMUR1Q9HB89 426 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 APOBEC3GQ9HC16 384 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 OSER1Q9NX31 292 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 EVLQ9UI08 416 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
TM9SF1-211ENST00000531406 CEP295Q9C0D2 2601 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 PTPRDP23468 1912 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 A0A1W2PQH9 124 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 KIF20AO95235 890 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 NTSR1P30989 418 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 WASP42768 502 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 GCLMP48507 274 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 MIB1Q86YT6 1006 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 TAS1R2Q8TE23 839 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 MARK1Q9P0L2 795 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 WDR35Q9P2L0 1181 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-211ENST00000531406 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 A0A1W2PQF6 199 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 CACNG3O60359 315 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 CILPO75339 1184 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 RARGP13631 454 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 HOXB2P14652 356 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 TYRP14679 529 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 GABRG2P18507 467 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 CD58P19256 250 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NR2F2P24468 414 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 SYKP43405 635 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NDUFA8P51970 172 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 GOLGA8FQ08AF8 430 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 GOLGA8DPQ0D2H9 430 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 LMAN2Q12907 356 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 NFIL3Q16649 462 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 TRIM61Q5EBN2 209 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 SH3PXD2AQ5TCZ1 1133 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 LYSMD4Q5XG99 296 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 EGFLAMQ63HQ2 1017 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 KLHDC10Q6PID8 442 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 SCD5Q86SK9 330 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 FAM186BQ8IYM0 893 aa13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 CCDC47Q96A33 483 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 XPO6Q96QU8 1125 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-211ENST00000531406 ACOX2Q99424 681 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms