RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ZNF233A6NK53 670 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 PRRT4C9JH25 899 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SLC9A3R1O14745 358 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 MAP3K13O43283 966 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 BEST1O76090 585 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 TNNC2P02585 160 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 CFIP05156 583 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SERPINF2P08697 491 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ZDHHC11BP0C7U3 371 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 NDUFV2P19404 249 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SYT1P21579 422 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 HOXD12P35452 270 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 GNL1P36915 607 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 PPP3CCP48454 512 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 MYL6P60660 151 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 UBE2HP62256 183 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ZNF33AQ06730 810 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SCAPQ12770 1279 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ALCAMQ13740 583 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 E2F4Q16254 413 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SNRNP35Q16560 246 aaKnown RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 DUOXA2Q1HG44 320 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 WDR72Q3MJ13 1102 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 C10orf76Q5T2E6 689 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 CCDC183Q5T5S1 534 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SNX30Q5VWJ9 437 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 TOGARAM2Q6ZUX3 1019 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 RAB44Q7Z6P3 723 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 MINDY1Q8N5J2 469 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ZNF513Q8N8E2 541 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ZMIZ2Q8NF64 920 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 GTPBP2Q9BX10 602 aaKnown RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 ELOVL4Q9GZR5 314 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SDCBP2Q9H190 292 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SMYD3Q9H7B4 428 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 CHORDC1Q9UHD1 332 aaPredicted RBP9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 SLC6A14Q9UN76 642 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 MTMR6Q9Y217 621 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 TBC1D3BA6NDS4 549 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 KALRNO60229 2985 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 C1QL1O75973 258 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 TBX18O95935 607 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 DLATP10515 647 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 HOXB2P14652 356 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 YWHAQP27348 245 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 STAT6P42226 847 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 CASP4P49662 377 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SLC5A3P53794 718 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 CDH8P55286 799 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 GAD2Q05329 585 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 PSMD6Q15008 389 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 DUOXA1Q1HG43 343 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 TDRD10Q5VZ19 366 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 FAM35AQ86V20 835 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 NUP93Q8N1F7 819 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 PGBD3Q8N328 593 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 PDILTQ8N807 584 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 RDH13Q8NBN7 331 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 B3GALNT2Q8NCR0 500 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 OR6B3Q8NGW1 331 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 FBXO32Q969P5 355 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 CCDC127Q96BQ5 260 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SLITRK1Q96PX8 696 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 USP28Q96RU2 1077 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SNX25Q9H3E2 840 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 TSPY26PQ9H489 355 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SLC32A1Q9H598 525 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SPHK2Q9NRA0 654 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 AGPAT3Q9NRZ7 376 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 DNAAF2Q9NVR5 837 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 OSER1Q9NX31 292 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 GMIPQ9P107 970 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 TBC1D14Q9P2M4 693 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 HMGXB4Q9UGU5 601 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 STARD13Q9Y3M8 1113 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 RAD54BQ9Y620 910 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 MYLKQ15746 1914 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 SHROOM3Q8TF72 1996 aa9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 URB1O60287 2271 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-205ENST00000531158 ASXL3Q9C0F0 2248 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 SYCE3A1L190 88 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 A8MXQ7 604 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 WASH3PC4AMC7 463 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 KIAA0391O15091 583 aaKnown RBP9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 CLIC2O15247 247 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 ARHGAP6O43182 974 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 AP5Z1O43299 807 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 STAU1O95793 577 aaKnown RBP9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 IRF1P10914 325 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 TUBP50607 506 aa9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 GFPT1Q06210 699 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-205ENST00000531158 CYP24A1Q07973 514 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms