RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 GTSE1Q9NYZ3 720 aa12.47□□□□□ -0.41
LTBP3-219ENST00000530990 CLIC5Q9NZA1 410 aa12.47□□□□□ -0.41
LTBP3-219ENST00000530990 CFAP97Q9P2B7 532 aa12.47□□□□□ -0.41
LTBP3-219ENST00000530990 TJP2Q9UDY2 1190 aa12.47□□□□□ -0.41
LTBP3-219ENST00000530990 PIAS3Q9Y6X2 628 aa12.47□□□□□ -0.41
LTBP3-219ENST00000530990 SHISA7A6NL88 538 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 E5RJQ4 531 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 E7ENQ6 273 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 IRF1P10914 325 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 RALAP11233 206 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 KRT9P35527 623 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 ATP5C1P36542 298 aaKnown RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 IFNAR2P48551 515 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 VCPP55072 806 aaKnown RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 STARD6P59095 220 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 BPIFB4P59827 614 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 FANCCQ00597 558 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 PRKCQQ04759 706 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 DDX42Q86XP3 938 aaKnown RBP eCLIP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 WDTC1Q8N5D0 677 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 STK32AQ8WU08 396 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 DDX1Q92499 740 aaKnown RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 WBP2Q969T9 261 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 CPXM1Q96SM3 734 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 KLF16Q9BXK1 252 aaPredicted RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 FOXQ1Q9C009 403 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 MIS12Q9H081 205 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.41
LTBP3-219ENST00000530990 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
LTBP3-219ENST00000530990 A0A1W2PQC6 194 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 FAM170AA1A519 330 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 OTOL1A6NHN0 477 aaPredicted RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 FBXO21O94952 628 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 CD72P21854 359 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 STAT1P42224 750 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 ACADSBP45954 432 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 ZNF445P59923 1031 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 EFEMP1Q12805 493 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 RUNX3Q13761 415 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 NR1I3Q14994 352 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 PDGFRLQ15198 375 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 EML3Q32P44 896 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 ITPRIPL2Q3MIP1 535 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 BSPRYQ5W0U4 402 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 BTBD8Q5XKL5 378 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 TADA2BQ86TJ2 420 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 MIB1Q86YT6 1006 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 SLC20A1Q8WUM9 679 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 IRGQQ8WZA9 623 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 EDEM1Q92611 657 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 SHDQ96IW2 340 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 PIWIL1Q96J94 861 aaKnown RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 DDX23Q9BUQ8 820 aaKnown RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 LHX5Q9H2C1 402 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 DNMT3LQ9UJW3 386 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 NOCTQ9UK39 431 aaKnown RBP12.45□□□□□ -0.42
LTBP3-219ENST00000530990 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 CEP83Q9Y592 693 aa12.45□□□□□ -0.42
LTBP3-219ENST00000530990 KANSL1LA0AUZ9 987 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 E2F8A0AVK6 867 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 SPECC1L-ADORA2AF8WAN1 911 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 STK25O00506 426 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 PAPSS1O43252 624 aaPredicted RBP12.44□□□□□ -0.42
LTBP3-219ENST00000530990 PI15O43692 258 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 LTFP02788 710 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 ERBB2P04626 1255 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 MMEP08473 750 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 AOC1P19801 751 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CTHP32929 405 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
LTBP3-219ENST00000530990 UBASH3AP57075 661 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 UBXN2BQ14CS0 331 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 PTPN20Q4JDL3 420 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 ASTLQ6HA08 431 aaPredicted RBP12.44□□□□□ -0.42
LTBP3-219ENST00000530990 TXNDC11Q6PKC3 985 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CACNA2D4Q7Z3S7 1137 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 TMEM110Q86TL2 294 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 SCUBE3Q8IX30 993 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CPA6Q8N4T0 437 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 TMEM105Q8N8V8 129 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 PJA1Q8NG27 643 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 BAP1Q92560 729 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CHFRQ96EP1 664 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 CDK5RAP1Q96SZ6 601 aaKnown RBP12.44□□□□□ -0.42
LTBP3-219ENST00000530990 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 LINC00597Q9H2U6 94 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 ECT2Q9H8V3 914 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 LTB4R2Q9NPC1 389 aa12.44□□□□□ -0.42
LTBP3-219ENST00000530990 MARCH2Q9P0N8 246 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms