RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 SRGAP2CP0DJJ0 459 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 ARSAP15289 507 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 TKTP29401 623 aaKnown RBP8.22□□□□□ -1.09
POLB-216ENST00000530566 CYP4A11Q02928 519 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 MTERF2Q49AM1 385 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 TPGS2Q68CL5 300 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
POLB-216ENST00000530566 NOTUMQ6P988 496 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 IL27RAQ6UWB1 636 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 SRGAP1Q7Z6B7 1085 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 SLC41A1Q8IVJ1 513 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 DHX40Q8IX18 779 aaKnown RBP8.22□□□□□ -1.09
POLB-216ENST00000530566 C3orf58Q8NDZ4 430 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 CCDC51Q96ER9 411 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 MINDY3Q9H8M7 445 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 TBC1D22BQ9NU19 505 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 GMIPQ9P107 970 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 ADAMTS6Q9UKP5 1117 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 ZFHX3Q15911 3703 aa8.22□□□□□ -1.09
POLB-216ENST00000530566 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.09
POLB-216ENST00000530566 MYH9P35579 1960 aaKnown RBP8.21□□□□□ -1.09
POLB-216ENST00000530566 GON4LQ3T8J9 2241 aa8.21□□□□□ -1.09
POLB-216ENST00000530566 K7ENP7 123 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 TRAPPC3O43617 180 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 FGF19O95750 216 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 CDK4P11802 303 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 HNRNPLP14866 589 aaKnown RBP eCLIP8.21□□□□□ -1.1
POLB-216ENST00000530566 CD96P40200 585 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 GRK6P43250 576 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 TARBP2Q15633 366 aaKnown RBP8.21□□□□□ -1.1
POLB-216ENST00000530566 HLA-BQ31612 363 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 WDR45BQ5MNZ6 344 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 HES3Q5TGS1 186 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 INO80CQ6PI98 192 aaPredicted RBP8.21□□□□□ -1.1
POLB-216ENST00000530566 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 ZNF577Q9BSK1 485 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 LRRC3Q9BY71 257 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 DPH1Q9BZG8 443 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 FTSJ1Q9UET6 329 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 COL4A3BPQ9Y5P4 624 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.21□□□□□ -1.1
POLB-216ENST00000530566 U3KQE9 123 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 PTPRDP23468 1912 aa8.21□□□□□ -1.1
POLB-216ENST00000530566 KIAA1549LQ6ZVL6 1849 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 A0A1B0GTW7 788 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 ESYT2A0FGR8 921 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 K7EQS6 105 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 B3GAT3O94766 335 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 THP07101 528 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 SFTPCP11686 197 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 SMARCA1P28370 1054 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 AXLP30530 894 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 EPHB3P54753 998 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 MRPS21P82921 87 aaKnown RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 PLD1Q13393 1074 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 IKZF1Q13422 519 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 PDGFRLQ15198 375 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 SF3A1Q15459 793 aaKnown RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 IGFBP7Q16270 282 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 ZNF648Q5T619 568 aaPredicted RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 NIPA1Q7RTP0 329 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 PLA2G4DQ86XP0 818 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 SIRT2Q8IXJ6 389 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 SRRM1Q8IYB3 904 aaKnown RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 ALLCQ8N6M5 410 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 TXNDC5Q8NBS9 432 aaKnown RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 CPB2Q96IY4 423 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 HIC2Q96JB3 615 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 HEXIM2Q96MH2 286 aaKnown RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 ZNF578Q96N58 590 aaPredicted RBP8.2□□□□□ -1.1
POLB-216ENST00000530566 SLC38A3Q99624 504 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.2□□□□□ -1.1
POLB-216ENST00000530566 TASP1Q9H6P5 420 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 ECT2Q9H8V3 914 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 HELLSQ9NRZ9 838 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 MAFFQ9ULX9 164 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 PCDHGA1Q9Y5H4 931 aa8.2□□□□□ -1.1
POLB-216ENST00000530566 NUP210Q8TEM1 1887 aaPredicted RBP8.19□□□□□ -1.1
POLB-216ENST00000530566 CEP192Q8TEP8 1941 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 PLXND1Q9Y4D7 1925 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 H7C4K7 107 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 I3L4J1 428 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 ENC1O14682 589 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 TSPAN1O60635 241 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 NDUFS2O75306 463 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 RFPL3O75679 317 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 KLF8O95600 359 aaPredicted RBP8.19□□□□□ -1.1
POLB-216ENST00000530566 ITGB6P18564 788 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 BMP6P22004 513 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 GABRR2P28476 465 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 BFSP1Q12934 665 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 INAVAQ3KP66 663 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 EOGTQ5NDL2 527 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 CCDC81Q6ZN84 652 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
POLB-216ENST00000530566 TICAM1Q8IUC6 712 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms