RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 PPP1R16BQ96T49 567 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 SHCBP1LQ9BZQ2 653 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 INO80BQ9C086 356 aaPredicted RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 S100A14Q9HCY8 104 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 PCSK1NQ9UHG2 260 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 ARHGAP42A6NI28 874 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 VILLO15195 856 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 C6orf222P0C671 652 aaPredicted RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 MAGEA10P43363 369 aaPredicted RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 AQP5P55064 265 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 ZNF280AP59817 542 aaPredicted RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 TGFB2P61812 414 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 BST1Q10588 318 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 PTK7Q13308 1070 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 DUOXA2Q1HG44 320 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 PAOXQ6QHF9 649 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 CATSPERGQ6ZRH7 1159 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 DHDDSQ86SQ9 333 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 POU5F2Q8N7G0 328 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 SLC26A7Q8TE54 656 aa14.75□□□□□ -0.05
USP48-213ENST00000529637 CCDC124Q96CT7 223 aaKnown RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
USP48-213ENST00000529637 MYOCOSA0A1B0GUC4 107 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 TMEM191CA6NGB0 347 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 SPECC1L-ADORA2AF8WAN1 911 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 NOP56O00567 594 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 ADCY3O60266 1144 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 ATP6V1G1O75348 118 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 PDE5AO76074 875 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 TMEM63AO94886 807 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 UQCRBP14927 111 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 TCF7P36402 384 aaPredicted RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 ARL2P36404 184 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 RAP1GAPP47736 663 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 OAZ1P54368 228 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 CLDN10P78369 228 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 C6orf163Q5TEZ5 329 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 PALM2Q8IXS6 379 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 RBM12BQ8IXT5 1001 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 NME8Q8N427 588 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 ATP11CQ8NB49 1132 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 IL1RAPL1Q9NZN1 696 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 TAGLN3Q9UI15 199 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 SHOC2Q9UQ13 582 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 MAFBQ9Y5Q3 323 aaPredicted RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 C19orf81C9J6K1 198 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 CPOXP36551 454 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 EPHB1P54762 984 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 OGDHQ02218 1023 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 KBTBD12Q3ZCT8 623 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 RBM44Q6ZP01 1051 aaKnown RBP14.74□□□□□ -0.05
USP48-213ENST00000529637 CHSY1Q86X52 802 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 CCDC106Q9BWC9 280 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 NIF3L1Q9GZT8 377 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 VPS33BQ9H267 617 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 CNTNAP2Q9UHC6 1331 aa14.74□□□□□ -0.05
USP48-213ENST00000529637 COQ9O75208 318 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 PRKCBP05771 671 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 GJB1P08034 283 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 GRM2Q14416 872 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 PDK3Q15120 406 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 LY6KQ17RY6 165 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 FAM160B1Q5W0V3 765 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 BRSK2Q8IWQ3 736 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 EMC1Q8N766 993 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 GDPD5Q8WTR4 605 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 CCDC28BQ9BUN5 200 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 GGA3Q9NZ52 723 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 STYXL1Q9Y6J8 313 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 NFKBIEO00221 500 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 MAGEB3O15480 346 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 ASS1P00966 412 aaKnown RBP14.73□□□□□ -0.05
USP48-213ENST00000529637 ZNF252P-AS1Q0IIN9 211 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 MMEL1Q495T6 779 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 DLK2Q6UY11 383 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 APOPT1Q96IL0 206 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 ZNF510Q9Y2H8 683 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 SNCAIPQ9Y6H5 919 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 TOM1L1O75674 476 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 SMIM18P0DKX4 95 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 RPS12P25398 132 aaKnown RBP14.73□□□□□ -0.05
USP48-213ENST00000529637 STIP1P31948 543 aaKnown RBP14.73□□□□□ -0.05
USP48-213ENST00000529637 PHBP35232 272 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 PEX6Q13608 980 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 TFDP3Q5H9I0 405 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 DUS1LQ6P1R4 473 aaKnown RBP14.73□□□□□ -0.05
USP48-213ENST00000529637 UGT2A3Q6UWM9 527 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 ZCCHC23Q6ZST2 131 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 METTL25Q8N6Q8 603 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 TRAPPC12Q8WVT3 735 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 RSAD2Q8WXG1 361 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 TFAP2BQ92481 460 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 RILPQ96NA2 401 aa14.73□□□□□ -0.05
USP48-213ENST00000529637 SRPK1Q96SB4 655 aaKnown RBP14.73□□□□□ -0.05
USP48-213ENST00000529637 TJP2Q9UDY2 1190 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms