RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 VPS28Q9UK41 221 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 FAM86B1E9PN63 330 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 H3BQF6 201 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 M0R3G1 203 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 GUCA1CO95843 209 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 FAM86B2P0C5J1 330 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CYLC2Q14093 348 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CD302Q8IX05 232 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 C4orf19Q8IY42 314 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ERLEC1Q96DZ1 483 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 GPRC5DQ9NZD1 345 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 A0A087X0B3 334 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ZSCAN5CA6NGD5 496 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MICAL2O94851 1124 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 GJB6O95452 261 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 KRT8P05787 483 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RARGP13631 454 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SHMT1P34896 483 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SCTRP47872 440 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 CORO7P57737 925 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 BST2Q10589 180 aaKnown RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 NFYCQ13952 458 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TTLL9Q3SXZ7 439 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PDPK2PQ6A1A2 396 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 DEFB128Q7Z7B8 93 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 USP13Q92995 863 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ZFP42Q96MM3 310 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SNX13Q9Y5W8 968 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 LMTK2Q8IWU2 1503 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 WDR27A2RRH5 827 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PLA2G6O60733 806 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RHOCP08134 193 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 CAPZA2P47755 286 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 POU6F1Q14863 301 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 C9orf131Q5VYM1 1079 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 WDR93Q6P2C0 686 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TFAP2DQ7Z6R9 452 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SCUBE1Q8IWY4 988 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SUGP1Q8IWZ8 645 aaKnown RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MYO1HQ8N1T3 1032 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 C10orf53Q8N6V4 93 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 CNPY3Q9BT09 278 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 L2HGDHQ9H9P8 463 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PDGFCQ9NRA1 345 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RNF103O00237 685 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TSPAN3O60637 253 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 CKMP06732 381 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 NDST1P52848 882 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RHOAP61586 193 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 STX5Q13190 355 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TP53BP2Q13625 1128 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SEMA4DQ92854 862 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 RNF19AQ9NV58 838 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TSPAN16Q9UKR8 245 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 VANGL2Q9ULK5 521 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 VPS9D1Q9Y2B5 631 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ABCA9Q8IUA7 1624 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 A0A0A6YYK5 440 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 KRT87PA6NCN2 255 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MEI4A8MW99 385 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PIK3CDO00329 1044 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 TIMM44O43615 452 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 STRNO43815 780 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 VIL1P09327 827 aaKnown RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 THRAP10827 490 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PPATQ06203 517 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ADIGQ0VDE8 80 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ERMARDQ5T6L9 678 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ERAP2Q6P179 960 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 BBS7Q8IWZ6 715 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MCOLN2Q8IZK6 566 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF518BQ9C0D4 1074 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 GPAMQ9HCL2 828 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ERI2A8K979 691 aaKnown RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PRR23D1E9PI22 279 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PRR23D2P0DMB1 279 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 GZMAP12544 262 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 GRIK4Q16099 956 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ERO1BQ86YB8 467 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ABRAQ8N0Z2 381 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 SLC5A5Q92911 643 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MTMR8Q96EF0 704 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 CATSPER2Q96P56 530 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 DCLK3Q9C098 648 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 EHD4Q9H223 541 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 MROH8Q9H579 483 aa8.37□□□□□ -1.07
CTNND1-220ENST00000529526 ADARB2Q9NS39 739 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms