RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CAMK1GQ96NX5 476 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 PI4K2AQ9BTU6 479 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 MTMR12Q9C0I1 747 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 EBF1Q9UH73 591 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ITGA11Q9UKX5 1188 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 DSEQ9UL01 958 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 POLIQ9UNA4 740 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 SLC8A2Q9UPR5 921 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 MRPS23Q9Y3D9 190 aaKnown RBP9.06□□□□□ -0.96
SSBP3-212ENST00000528930 MAP4K5Q9Y4K4 846 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 INSL5Q9Y5Q6 135 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ICE1Q9Y2F5 2266 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 SLC38A8A6NNN8 435 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 SPECC1L-ADORA2AF8WAN1 911 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PDXKO00764 312 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PRRG1O14668 218 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 TLX3O43711 291 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-212ENST00000528930 CST3P01034 146 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-212ENST00000528930 LRG1P02750 347 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 TMEM191BP0C7N4 346 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PTPN2P17706 415 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 GBP1P32455 592 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PNPLA4P41247 253 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 RBP5P82980 135 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 RHDQ02161 417 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 DUSP4Q13115 394 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 KCNB1Q14721 858 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PSMD6Q15008 389 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 DUOXA2Q1HG44 320 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PEAR1Q5VY43 1037 aaPredicted RBP9.05□□□□□ -0.96
SSBP3-212ENST00000528930 CENPPQ6IPU0 288 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 TRAPPC11Q7Z392 1133 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 LIMS2Q7Z4I7 341 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 LRRTM3Q86VH5 581 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 WDR49Q8IV35 697 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 SLC9A9Q8IVB4 645 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 LRRC52Q8N7C0 313 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 ATAD1Q8NBU5 361 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 GOLGA5Q8TBA6 731 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PIGKQ92643 395 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 ANKRD36BP1Q96IX9 119 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 PGLYRP2Q96PD5 576 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 CGRRF1Q99675 332 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 ZCWPW1Q9H0M4 648 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 GDAP2Q9NXN4 497 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 CEP72Q9P209 647 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 L1RE1Q9UN81 338 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 TRAF3IP3Q9Y228 551 aa9.05□□□□□ -0.96
SSBP3-212ENST00000528930 GABRDO14764 452 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF263O14978 683 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 SPINT1O43278 529 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 EXOC3O60645 756 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 OPHN1O60890 802 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 MOSPD3O75425 235 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 RHOP08100 348 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 KRT19P08727 400 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 DLATP10515 647 aaKnown RBP9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TNNI1P19237 187 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CR2P20023 1033 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CCR2P41597 374 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CTSOP43234 321 aaPredicted RBP9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CASP4P49662 377 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 EPHA5P54756 1037 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CLDN10P78369 228 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TWF1Q12792 350 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 PNOCQ13519 176 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 PON2Q15165 354 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 OSTM1Q86WC4 334 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 METTL23Q86XA0 190 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 THEM5Q8N1Q8 247 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
SSBP3-212ENST00000528930 PDCL2Q8N4E4 241 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TTC9BQ8N6N2 239 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TOP6BLQ8N6T0 577 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 SPATA20Q8TB22 786 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 PARD3BQ8TEW8 1205 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CCDC127Q96BQ5 260 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TCEAL4Q96EI5 215 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 HHIPQ96QV1 700 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 FNBP1Q96RU3 617 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 LRRC3Q9BY71 257 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TRIM4Q9C037 500 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 TMLHEQ9NVH6 421 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
SSBP3-212ENST00000528930 HSFX1Q9UBD0 423 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 YIPF1Q9Y548 306 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 SNX9Q9Y5X1 595 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 POLQO75417 2590 aa9.04□□□□□ -0.96
SSBP3-212ENST00000528930 CLEC18AA5D8T8 446 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 GOLGA6L4A6NEF3 574 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 LRRIQ3A6PVS8 624 aaPredicted RBP9.03□□□□□ -0.96
SSBP3-212ENST00000528930 HCRTO43612 131 aa9.03□□□□□ -0.96
SSBP3-212ENST00000528930 SH3BP5O60239 455 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms