RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 SPHK2Q9NRA0 654 aa12.2□□□□□ -0.46
SRPRA-203ENST00000528744 TBC1D14Q9P2M4 693 aa12.2□□□□□ -0.46
SRPRA-203ENST00000528744 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
SRPRA-203ENST00000528744 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
SRPRA-203ENST00000528744 GTF3C3Q9Y5Q9 886 aa12.2□□□□□ -0.46
SRPRA-203ENST00000528744 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TULP2O00295 520 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 HOXC11O43248 304 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 APODP05090 189 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CISD3P0C7P0 127 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 RARGP13631 454 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 PSMC2P35998 433 aaKnown RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 GRIA2P42262 883 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 WASP42768 502 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 PRCPP42785 496 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TUBP50607 506 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CREB5Q02930 508 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 MAP7D1Q3KQU3 841 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 AASDHQ4L235 1098 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CBWD6Q4V339 395 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CBWD3Q5JTY5 395 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CBWD5Q5RIA9 395 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 N4BP2L1Q5TBK1 243 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 PMS2CLQ68D20 193 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TTC30AQ86WT1 665 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CNOT6LQ96LI5 555 aaKnown RBP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CYP3A43Q9HB55 503 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TMEM8AQ9HCN3 771 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 CYLDQ9NQC7 956 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.19□□□□□ -0.46
SRPRA-203ENST00000528744 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 USP3Q9Y6I4 520 aa12.19□□□□□ -0.46
SRPRA-203ENST00000528744 ATP8B3O60423 1300 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 EML5Q05BV3 1969 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 TBC1D3BA6NDS4 549 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-203ENST00000528744 CAVIN2O95810 425 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 ADH1CP00326 375 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 P4HA1P13674 534 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 GBP1P32455 592 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 P2RY2P41231 377 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 LIMK1P53667 647 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 RAD23BP54727 409 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 ANO4Q32M45 955 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 USP39Q53GS9 565 aaKnown RBP12.18□□□□□ -0.46
SRPRA-203ENST00000528744 ANKRD40Q6AI12 368 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 Q6ZNB5 142 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 TPGS1Q6ZTW0 290 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 DDX42Q86XP3 938 aaKnown RBP eCLIP12.18□□□□□ -0.464e-7■■■□□ 18.4
SRPRA-203ENST00000528744 DEFB119Q8N690 84 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
SRPRA-203ENST00000528744 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 SCAND2PQ9GZW5 306 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-203ENST00000528744 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 TLR8Q9NR97 1041 aaKnown RBP12.18□□□□□ -0.46
SRPRA-203ENST00000528744 VPS45Q9NRW7 570 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 CLEC4EQ9ULY5 219 aa12.18□□□□□ -0.46
SRPRA-203ENST00000528744 MYO18AQ92614 2054 aaKnown RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 A0A1W2PQF6 199 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 TRIM49BA6NDI0 452 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 C4orf47A7E2U8 309 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 GIPC1O14908 333 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 GABBR2O75899 941 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 PTGER3P43115 390 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 IRX4P78413 519 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 EGFLAMQ63HQ2 1017 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 KRT39Q6A163 491 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 KIAA1211LQ6NV74 962 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 BHLHA9Q7RTU4 235 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 TMEFF1Q8IYR6 380 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 BHMTQ93088 406 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 OTUB2Q96DC9 234 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 LSM14BQ9BX40 385 aaKnown RBP12.17□□□□□ -0.46
SRPRA-203ENST00000528744 SLC6A17Q9H1V8 727 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 CD93Q9NPY3 652 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 CISHQ9NSE2 258 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 PLK2Q9NYY3 685 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 DEC1Q9P2X7 70 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 FBXO10Q9UK96 956 aa12.17□□□□□ -0.46
SRPRA-203ENST00000528744 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms