RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLC6A11P48066 632 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CRY1Q16526 586 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 PLK5Q496M5 336 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 PPP1R26Q5T8A7 1209 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 ARHGAP17Q68EM7 881 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CCDC186Q7Z3E2 898 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 BBS7Q8IWZ6 715 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 ETFBKMTQ8IXQ9 262 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 SMYD4Q8IYR2 804 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 SMARCE1Q969G3 411 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CNOT6LQ96LI5 555 aaKnown RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 HEXIM2Q96MH2 286 aaKnown RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 METTL14Q9HCE5 456 aaKnown RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CISHQ9NSE2 258 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CLIC5Q9NZA1 410 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 WDR35Q9P2L0 1181 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.96□□□□□ -0.01
CAPN1-212ENST00000527887 TBC1D3BA6NDS4 549 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 RALAP11233 206 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 RARGP13631 454 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 HOXC13P31276 330 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 LIMK1P53667 647 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 SEC13P55735 322 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 PLA2G2CQ5R387 149 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 ANKRD40Q6AI12 368 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 ARHGAP18Q8N392 663 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 C12orf50Q8NA57 414 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 SEMA4DQ92854 862 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 DHTKD1Q96HY7 919 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 DUSP15Q9H1R2 295 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 ARRDC1-AS1Q9H2J1 176 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 POLMQ9NP87 494 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 MARK1Q9P0L2 795 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 ARMCX3Q9UH62 379 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-212ENST00000527887 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 ZNF510Q9Y2H8 683 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 STARD13Q9Y3M8 1113 aa14.95□□□□□ -0.02
CAPN1-212ENST00000527887 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-212ENST00000527887 PSMA7O14818 248 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 PMM2O15305 246 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 CYP26A1O43174 497 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 GREM1O60565 184 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 TBX18O95935 607 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 KIR2DL1P43626 348 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-212ENST00000527887 COG7P83436 770 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 BYSLQ13895 437 aaKnown RBP14.94□□□□□ -0.02
CAPN1-212ENST00000527887 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 TCERG1LQ5VWI1 586 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 FOXR2Q6PJQ5 311 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 TMEM25Q86YD3 366 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 PHTF2Q8N3S3 785 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 IL17RCQ8NAC3 791 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 ANKRD52Q8NB46 1076 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 SLC4A11Q8NBS3 891 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 CEP63Q96MT8 703 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 POLR3BQ9NW08 1133 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-212ENST00000527887 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
CAPN1-212ENST00000527887 A0A1W2PQH9 124 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 SCAMP3O14828 347 aaKnown RBP14.93□□□□□ -0.02
CAPN1-212ENST00000527887 TULP3O75386 442 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 TBXAS1P24557 533 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-212ENST00000527887 TIE1P35590 1138 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 PGFP49763 221 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 RAD23BP54727 409 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 ANO4Q32M45 955 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 AASDHQ4L235 1098 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-212ENST00000527887 CBWD6Q4V339 395 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 DCAF17Q5H9S7 520 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-212ENST00000527887 CBWD3Q5JTY5 395 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 SPDYCQ5MJ68 293 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 CBWD5Q5RIA9 395 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 C10orf120Q5SQS8 335 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 C12orf40Q86WS4 652 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 CCDC33Q8N5R6 958 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 ALLCQ8N6M5 410 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 TERB1Q8NA31 727 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 TXNDC5Q8NBS9 432 aaKnown RBP14.93□□□□□ -0.02
CAPN1-212ENST00000527887 DCLK3Q9C098 648 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 NMUR1Q9HB89 426 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 LMBRD1Q9NUN5 540 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 OSER1Q9NX31 292 aa14.93□□□□□ -0.02
CAPN1-212ENST00000527887 NCOR2Q9Y618 2525 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 MED19A0JLT2 244 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-212ENST00000527887 CACNG3O60359 315 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 KLF8O95600 359 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-212ENST00000527887 IRF1P10914 325 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 CHRM1P11229 460 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-212ENST00000527887 CHKAP35790 457 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 MPLP40238 635 aa14.92□□□□□ -0.02
CAPN1-212ENST00000527887 CETN1Q12798 172 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms