RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 DUOXA2Q1HG44 320 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 SPRED3Q2MJR0 410 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 PLEKHG6Q3KR16 790 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TMEM196Q5HYL7 178 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 BEND6Q5SZJ8 279 aaPredicted RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 ARHGAP40Q5TG30 622 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 CREB3L3Q68CJ9 461 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 HGSNATQ68CP4 663 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 FSTL4Q6MZW2 842 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 PCSK4Q6UW60 755 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ATG14Q6ZNE5 492 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 GLRX5Q86SX6 157 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 MARCH9Q86YJ5 346 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 AOPEPQ8N6M6 819 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 BPIFB1Q8TDL5 484 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 EPS8L3Q8TE67 593 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 GOLGA1Q92805 767 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 RRP36Q96EU6 259 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 MED8Q96G25 268 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 CDC6Q99741 560 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 LLPHQ9BRT6 129 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 CARD6Q9BX69 1037 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 SEMA4CQ9C0C4 833 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 XPO4Q9C0E2 1151 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 HSD3B7Q9H2F3 369 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 RIOX1Q9H6W3 641 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TRPV4Q9HBA0 871 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 CYP4F11Q9HBI6 524 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 AGO4Q9HCK5 861 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 AGPAT5Q9NUQ2 364 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TRMT1Q9NXH9 659 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 GABBR1Q9UBS5 961 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 CFAP45Q9UL16 551 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 L1RE1Q9UN81 338 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 DOPEY1Q5JWR5 2465 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TEX15Q9BXT5 2789 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ANK1P16157 1881 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 MYO9AB2RTY4 2548 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 FAM237AA0A1B0GTK4 181 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ARHGEF37A1IGU5 675 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ERICH2A1L162 156 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 GOLGA6L4A6NEF3 574 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 BECN2A8MW95 431 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 TRDMT1O14717 391 aaKnown RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 FOXP2O15409 715 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ADAM12O43184 909 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CBFA2T2O43439 604 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 TLX3O43711 291 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 ADAM11O75078 769 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CCNE2O96020 404 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ESRRAP11474 423 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 JUPP14923 745 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 GNSP15586 552 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CCR2P41597 374 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 PTGER3P43115 390 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 NLRP12P59046 1061 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 RPL6Q02878 288 aaKnown RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 TNK2Q07912 1038 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 TBX2Q13207 712 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 ITGB3BPQ13352 177 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 RUNX3Q13761 415 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ZRSR1Q15695 479 aaKnown RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 ENOX2Q16206 610 aaKnown RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 UBE2SQ16763 222 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 MTERF2Q49AM1 385 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ARHGAP15Q53QZ3 475 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 SPDYCQ5MJ68 293 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 FAM173BQ6P4H8 233 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 LRRC31Q6UY01 552 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 SLC36A4Q6YBV0 504 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CCDC73Q6ZRK6 1079 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ANKS3Q6ZW76 656 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ACAD11Q709F0 780 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 SND1Q7KZF4 910 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD7-205ENST00000527825 HDXQ7Z353 690 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 TMC6Q7Z403 805 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 SRGAP1Q7Z6B7 1085 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 FERMT3Q86UX7 667 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 TBC1D10CQ8IV04 446 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ARID3BQ8IVW6 561 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 VSTM4Q8IW00 320 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 LINC01465Q8N7H1 131 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 ZNF461Q8TAF7 563 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 RLN3Q8WXF3 142 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 BRF1Q92994 677 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 LIN37Q96GY3 246 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 CNOT6LQ96LI5 555 aaKnown RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 P2RY13Q9BPV8 354 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 PARD6BQ9BYG5 372 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 AGXT2Q9BYV1 514 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 KRT23Q9C075 422 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CLEC4MQ9H2X3 399 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 DEF6Q9H4E7 631 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 CXorf56Q9H5V9 222 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 SOX17Q9H6I2 414 aaPredicted RBP4.38□□□□□ -1.71
CHD7-205ENST00000527825 ANKZF1Q9H8Y5 726 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 HELLSQ9NRZ9 838 aa4.38□□□□□ -1.71
CHD7-205ENST00000527825 MIOSQ9NXC5 875 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms