RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 OR6B3Q8NGW1 331 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
SRPRA-202ENST00000527817 WBP2Q969T9 261 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 ZNF518BQ9C0D4 1074 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 DNAJC17Q9NVM6 304 aaKnown RBP13.05□□□□□ -0.32
SRPRA-202ENST00000527817 WSB2Q9NYS7 404 aaPredicted RBP13.05□□□□□ -0.32
SRPRA-202ENST00000527817 PTPRJQ12913 1337 aa13.05□□□□□ -0.32
SRPRA-202ENST00000527817 KALRNO60229 2985 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 FAM92AA1XBS5 289 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CLDN5O00501 218 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CACNG3O60359 315 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 GREM1O60565 184 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 PRPF6O94906 941 aaKnown RBP13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CISD3P0C7P0 127 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
SRPRA-202ENST00000527817 IL27RAQ6UWB1 636 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 WDR49Q8IV35 697 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 BAHD1Q8TBE0 780 aaPredicted RBP13.04□□□□□ -0.32
SRPRA-202ENST00000527817 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
SRPRA-202ENST00000527817 SCFD1Q8WVM8 642 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CDC6Q99741 560 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 GAREM1Q9H706 876 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CD93Q9NPY3 652 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 PCDHGB2Q9Y5G2 931 aa13.04□□□□□ -0.32
SRPRA-202ENST00000527817 A0A087WV48 116 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 TRABD2BA6NFA1 517 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 TYRP14679 529 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 GJB2P29033 226 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 ZNF132P52740 706 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 CYP4F3Q08477 520 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 CAMK2BQ13554 666 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
SRPRA-202ENST00000527817 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 RRAGBQ5VZM2 374 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 B3GALNT2Q8NCR0 500 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 RHBDD1Q8TEB9 315 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 TOE1Q96GM8 510 aaKnown RBP13.03□□□□□ -0.32
SRPRA-202ENST00000527817 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 BBS2Q9BXC9 721 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 KLF16Q9BXK1 252 aaPredicted RBP13.03□□□□□ -0.32
SRPRA-202ENST00000527817 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 DPEP3Q9H4B8 488 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 IL21RQ9HBE5 538 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 TM7SF3Q9NS93 570 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 TOR4AQ9NXH8 423 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 USP36Q9P275 1121 aaKnown RBP13.03□□□□□ -0.32
SRPRA-202ENST00000527817 FBXO10Q9UK96 956 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
SRPRA-202ENST00000527817 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.32
SRPRA-202ENST00000527817 METTL12A8MUP2 240 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 A8MXQ7 604 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 WASH3PC4AMC7 463 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 BCAT2O15382 392 aaPredicted RBP13.02□□□□□ -0.33
SRPRA-202ENST00000527817 CILPO75339 1184 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 STAU1O95793 577 aaKnown RBP13.02□□□□□ -0.33
SRPRA-202ENST00000527817 CER1O95813 267 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 NCAM1P13591 858 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 IDEP14735 1019 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 OXTRP30559 389 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 MATKP42679 507 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 BNC1Q01954 994 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
SRPRA-202ENST00000527817 HLA-BQ31612 363 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 KIAA1324Q6UXG2 1013 aaKnown RBP13.02□□□□□ -0.33
SRPRA-202ENST00000527817 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 GPR174Q9BXC1 333 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 FGFBP2Q9BYJ0 223 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
SRPRA-202ENST00000527817 PANK4Q9NVE7 773 aa13.02□□□□□ -0.33
SRPRA-202ENST00000527817 MEI4A8MW99 385 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 E9PAM4 449 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 NEDD8-MDP1E9PL57 170 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 TK2O00142 265 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 NPC1O15118 1278 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 FLRT2O43155 660 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ZIC2O95409 532 aaPredicted RBP13.01□□□□□ -0.33
SRPRA-202ENST00000527817 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
SRPRA-202ENST00000527817 IRF1P10914 325 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 DGKGP49619 791 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 SLC5A3P53794 718 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 TNNC1P63316 161 aa13.01□□□□□ -0.33
SRPRA-202ENST00000527817 C19orf57Q0VDD7 668 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms