RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 FAM124BQ9H5Z6 455 aaPredicted RBP11.72□□□□□ -0.53
SNRNP35-203ENST00000526639 RRAGDQ9NQL2 400 aaPredicted RBP11.72□□□□□ -0.53
SNRNP35-203ENST00000526639 C2orf42Q9NWW7 574 aa11.72□□□□□ -0.53
SNRNP35-203ENST00000526639 NAGPAQ9UK23 515 aa11.72□□□□□ -0.53
SNRNP35-203ENST00000526639 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 MYO16Q9Y6X6 1858 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 MDM4O15151 490 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 RARGP13631 454 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 HOXC13P31276 330 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 TUBP50607 506 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 NDRG1Q92597 394 aaKnown RBP11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 KREMEN1Q96MU8 473 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 THAP9Q9H5L6 903 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 USP3Q9Y6I4 520 aa11.71□□□□□ -0.53
SNRNP35-203ENST00000526639 PATJQ8NI35 1801 aa11.71□□□□□ -0.54
SNRNP35-203ENST00000526639 EGFP01133 1207 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 VDRP11473 427 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SLC9A1P19634 815 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 ATP5C1P36542 298 aaKnown RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 TKTL1P51854 596 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SLC8A3P57103 927 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 LRRC32Q14392 662 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 TMEM196Q5HYL7 178 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 FSTL4Q6MZW2 842 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 PKN3Q6P5Z2 889 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 ASCL5Q7RTU5 278 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 P2RY13Q9BPV8 354 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SLC24A3Q9HC58 644 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 IFNKQ9P0W0 207 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 HESX1Q9UBX0 185 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 O00370 1275 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 PIK3R2O00459 728 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 TRDMT1O14717 391 aaKnown RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 GFRA3O60609 400 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 NFATC1O95644 943 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SERPINC1P01008 464 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 CYP17A1P05093 508 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 BCAT1P54687 386 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 AMPD2Q01433 879 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 SATB1Q01826 763 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 GCNT1Q02742 428 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 BST2Q10589 180 aaKnown RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 NR1H3Q13133 447 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 DGKKQ5KSL6 1271 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 C10orf120Q5SQS8 335 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 CCDC186Q7Z3E2 898 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 MIB1Q86YT6 1006 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 BBS7Q8IWZ6 715 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 RBBP8NLQ8NC74 664 aaPredicted RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 ACP6Q9NPH0 428 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 FBXO4Q9UKT5 387 aa11.7□□□□□ -0.54
SNRNP35-203ENST00000526639 MYOFQ9NZM1 2061 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 ANTXRLA6NF34 631 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 KCNJ18B7U540 433 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 PROB1E7EW31 1015 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 PAEPP09466 180 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 KRT5P13647 590 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 CXCL12P48061 93 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 UBASH3AP57075 661 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 KCNJ12Q14500 433 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 DHCR24Q15392 516 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 TCP11X2Q5H9J9 407 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 RHBDF2Q6PJF5 856 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 APTXQ7Z2E3 356 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 CD101Q93033 1021 aa11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 NKD2Q969F2 451 aaPredicted RBP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 POLR3BQ9NW08 1133 aaPredicted RBP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 RIF1Q5UIP0 2472 aaKnown RBP11.69□□□□□ -0.54
SNRNP35-203ENST00000526639 E2F8A0AVK6 867 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 CBFA2T2O43439 604 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 RNF40O75150 1001 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 ZBED1O96006 694 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 LCP1P13796 627 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 CDC25BP30305 580 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 RGS7P49802 495 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 CCR3P51677 355 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 ADIGQ0VDE8 80 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 MESP2Q0VG99 397 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 KRT31Q15323 416 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
SNRNP35-203ENST00000526639 PMF1Q6P1K2 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms