RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PFKLP17858 780 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 NDUFV2P19404 249 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 RDXP35241 583 aaKnown RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 SLC5A3P53794 718 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SCAPQ12770 1279 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 ALCAMQ13740 583 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 PSMD6Q15008 389 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 TRIP6Q15654 476 aaKnown RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 FAM26FQ5R3K3 315 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 ATL3Q6DD88 541 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SPOPLQ6IQ16 392 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SLC36A4Q6YBV0 504 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 STXBP4Q6ZWJ1 553 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SLCO6A1Q86UG4 719 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 FAM35AQ86V20 835 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 DDX42Q86XP3 938 aaKnown RBP eCLIP6.96□□□□□ -1.3
CD44-221ENST00000526000 ETFBKMTQ8IXQ9 262 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 GRAMD1CQ8IYS0 662 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 XXYLT1Q8NBI6 393 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 ZMIZ2Q8NF64 920 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SETD7Q8WTS6 366 aaKnown RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 SCFD1Q8WVM8 642 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 GPR174Q9BXC1 333 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 KLF16Q9BXK1 252 aaPredicted RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 ELOVL4Q9GZR5 314 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 GZF1Q9H116 711 aaPredicted RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 PRDM16Q9HAZ2 1276 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 IL21RQ9HBE5 538 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 KIAA1586Q9HCI6 787 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 OSER1Q9NX31 292 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 NEUROG3Q9Y4Z2 214 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 ATP6V1DQ9Y5K8 247 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 CHD6Q8TD26 2715 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 IGF2RP11717 2491 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 ATRXP46100 2492 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 A0A1W2PQH9 124 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 KIAA0391O15091 583 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 SPTLC2O15270 562 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 TLR5O60602 858 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 VNN1O95497 513 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 C4BPAP04003 597 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 SYPP08247 313 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 CISD3P0C7P0 127 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 ACO1P21399 889 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 ATP5C1P36542 298 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 EIF2DP41214 584 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 NDST1P52848 882 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 DLG4P78352 724 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 NCOA4Q13772 614 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 COL28A1Q2UY09 1125 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 C10orf120Q5SQS8 335 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 GPRIN1Q7Z2K8 1008 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 FUKQ8N0W3 1084 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 TERB1Q8NA31 727 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 CEP76Q8TAP6 659 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 SLC2A14Q8TDB8 520 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 SORCS1Q8WY21 1168 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 SYAP1Q96A49 352 aaPredicted RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 P2RY11Q96G91 374 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 TOE1Q96GM8 510 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 XPO6Q96QU8 1125 aaKnown RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 XYLT2Q9H1B5 865 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 MMRN2Q9H8L6 949 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 NMUR1Q9HB89 426 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 DMAP1Q9NPF5 467 aaPredicted RBP6.95□□□□□ -1.3
CD44-221ENST00000526000 KRT82Q9NSB4 513 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 HMGXB4Q9UGU5 601 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 MTMR6Q9Y217 621 aa6.95□□□□□ -1.3
CD44-221ENST00000526000 TSC2P49815 1807 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 PI4KAP42356 2102 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 FAM149AA5PLN7 773 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 TMEM8BA6NDV4 472 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 LRRIQ3A6PVS8 624 aaPredicted RBP6.94□□□□□ -1.3
CD44-221ENST00000526000 MEI4A8MW99 385 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 POLR2DO15514 142 aaKnown RBP6.94□□□□□ -1.3
CD44-221ENST00000526000 CYP26A1O43174 497 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 HOXC11O43248 304 aaPredicted RBP6.94□□□□□ -1.3
CD44-221ENST00000526000 GREM1O60565 184 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 TSPAN3O60637 253 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 FAM163BP0C2L3 166 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 FTH1P19P0C7X4 201 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 RARGP13631 454 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 ATICP31939 592 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 DGKGP49619 791 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 AMPD3Q01432 767 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 CUL4BQ13620 913 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 E2F4Q16254 413 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 PRAMEF14Q5SWL7 426 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 SYCP2LQ5T4T6 812 aa6.94□□□□□ -1.3
CD44-221ENST00000526000 SHC4Q6S5L8 630 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms