RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 TRIM27P14373 513 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PHKG2P15735 406 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 IL1R2P27930 398 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 WNT3P56703 355 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 E2F1Q01094 437 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 ZIK1Q3SY52 487 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 MGAT5BQ3V5L5 792 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 GORABQ5T7V8 394 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 CAND1Q86VP6 1230 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 IZUMO1Q8IYV9 350 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PJA1Q8NG27 643 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 TMEM171Q8WVE6 324 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PHKBQ93100 1093 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PPP2R3CQ969Q6 453 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 FAM118BQ9BPY3 351 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 EFHD1Q9BUP0 239 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 STK31Q9BXU1 1019 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 DPH1Q9BZG8 443 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 TRMT13Q9NUP7 481 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 STK32BQ9NY57 414 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 AFF4Q9UHB7 1163 aaKnown RBP3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 GABRQQ9UN88 632 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 AFG3L2Q9Y4W6 797 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PAXBP1Q9Y5B6 917 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 SNX14Q9Y5W7 946 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 CCDC144AA2RUR9 1427 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 SNAPC4Q5SXM2 1469 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 TEX14Q8IWB6 1497 aa3.15□□□□□ -1.91
ECHDC1-218ENST00000525745 PDS5BQ9NTI5 1447 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 TRIM43BA6NCK2 446 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 PLEKHD1A6NEE1 506 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 E5RJQ4 531 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 CES2O00748 559 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 APAF1O14727 1248 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 DSCR3O14972 297 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 GCATO75600 419 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 ATP5F1P24539 256 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 RHBDL3P58872 404 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 LAMB3Q13751 1172 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 CYP1B1Q16678 543 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 FAM187BQ17R55 369 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 PLA1AQ53H76 456 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 RNASE12Q5GAN4 147 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 DCAF12L1Q5VU92 463 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 SHC4Q6S5L8 630 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MTHFD1LQ6UB35 978 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 C11orf96Q7Z7L8 435 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 SESTD1Q86VW0 696 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MICU3Q86XE3 530 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 ABRAQ8N0Z2 381 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 NGEFQ8N5V2 710 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MAML1Q92585 1016 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 SPSB4Q96A44 273 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 TRIM43Q96BQ3 446 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 PRR25Q96S07 402 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 STRBPQ96SI9 672 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MMS19Q96T76 1030 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 TBCBQ99426 244 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MESP1Q9BRJ9 268 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 THAP7Q9BT49 309 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 KRTAP1-5Q9BYS1 174 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 MYH16Q9H6N6 1097 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 COL20A1Q9P218 1284 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 ITGB1BP2Q9UKP3 347 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 SCAF8Q9UPN6 1271 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 RPRD2Q5VT52 1461 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 FANCD2Q9BXW9 1451 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 SHANK2Q9UPX8 1470 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 ITSN2Q9NZM3 1697 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 ARHGEF11O15085 1522 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 UGGT2Q9NYU1 1516 aa3.14□□□□□ -1.91
ECHDC1-218ENST00000525745 NAIPQ13075 1403 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 SCAPERQ9BY12 1400 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 MYMKA6NI61 221 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 TMEM232C9JQI7 657 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 PSMD9O00233 223 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 FOXN3O00409 490 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 SOCS2O14508 198 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 ADAM10O14672 748 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 RGS10O43665 173 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 SNHG28P0DPA3 235 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 KCNA3P22001 575 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 PIK3CBP42338 1070 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 DGKEP52429 567 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 RPS16P62249 146 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 IFIT5Q13325 482 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 PICALMQ13492 652 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 INSCQ1MX18 579 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 MAP9Q49MG5 647 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 TMED8Q6PL24 325 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 ZDHHC24Q6UX98 284 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 ZNF517Q6ZMY9 492 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 MRPL10Q7Z7H8 261 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 GAS2L3Q86XJ1 694 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 KRT73Q86Y46 540 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 KRT78Q8N1N4 520 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 SDR16C5Q8N3Y7 309 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 SIRT6Q8N6T7 355 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 NRACQ8N912 160 aa3.13□□□□□ -1.91
ECHDC1-218ENST00000525745 OR56A3Q8NH54 315 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms