RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GPS1Q13098 491 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 MTAPQ13126 283 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 MORC3Q14149 939 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 RAB30Q15771 203 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 SMN1Q16637 294 aaKnown RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 TMTC4Q5T4D3 741 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 CEP85Q6P2H3 762 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 FBXO38Q6PIJ6 1188 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 NAPRTQ6XQN6 538 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 PTCHD4Q6ZW05 846 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 SLC29A4Q7RTT9 530 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 ADGRG3Q86Y34 549 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 SYTL1Q8IYJ3 562 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 FSTL5Q8N475 847 aaPredicted RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 TMEM41AQ96HV5 264 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 WDR24Q96S15 920 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 WDR12Q9GZL7 423 aaKnown RBP5.14□□□□□ -1.59
CD44-215ENST00000525241 TMEM8AQ9HCN3 771 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 TMOD4Q9NZQ9 345 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 SERGEFQ9UGK8 458 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 SLC39A10Q9ULF5 831 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 WNT6Q9Y6F9 365 aa5.14□□□□□ -1.59
CD44-215ENST00000525241 TARM1B6A8C7 271 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ADAMTS3O15072 1205 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 CCNT2O60583 730 aaKnown RBP5.13□□□□□ -1.59
CD44-215ENST00000525241 JTBO76095 146 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 TECP42680 631 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 DIO1P49895 249 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 DEUP1Q05D60 604 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ATP1A4Q13733 1029 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ACOX1Q15067 660 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ST3GAL2Q16842 350 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ARHGAP15Q53QZ3 475 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ABHD5Q8WTS1 349 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 RPS6KC1Q96S38 1066 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 PLCB1Q9NQ66 1216 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 ASAP1Q9ULH1 1129 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
CD44-215ENST00000525241 COL11A2P13942 1736 aaPredicted RBP5.12□□□□□ -1.59
CD44-215ENST00000525241 WDR47O94967 919 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
CD44-215ENST00000525241 HOXA4Q00056 320 aaPredicted RBP5.12□□□□□ -1.59
CD44-215ENST00000525241 NSUN2Q08J23 767 aaKnown RBP eCLIP5.12□□□□□ -1.59
CD44-215ENST00000525241 LMAN2Q12907 356 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 GRHL2Q6ISB3 625 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 KIRREL2Q6UWL6 708 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 RD3Q7Z3Z2 195 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 TERB1Q8NA31 727 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
CD44-215ENST00000525241 CIPCQ9C0C6 399 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 IGSF9Q9P2J2 1179 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 MGAT4CQ9UBM8 478 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 DTNAQ9Y4J8 743 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 AOX1Q06278 1338 aa5.12□□□□□ -1.59
CD44-215ENST00000525241 A0A087WV62 115 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 DHHO43323 396 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 TMPRSS11DO60235 418 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 EXOC3O60645 756 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 PEX14O75381 377 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 TMEM225BP0DP42 221 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 YY1P25490 414 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 PBX1P40424 430 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 PROK1P58294 105 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 NHLH1Q02575 133 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 BIRC2Q13490 618 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 STARD3Q14849 445 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 AASDHQ4L235 1098 aaPredicted RBP5.11□□□□□ -1.59
CD44-215ENST00000525241 ARL6IP4Q66PJ3 421 aaKnown RBP5.11□□□□□ -1.59
CD44-215ENST00000525241 C1orf228Q6PIY5 440 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 TRIM72Q6ZMU5 477 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 MUL1Q969V5 352 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 SNX18Q96RF0 628 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 CRB3Q9BUF7 120 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 SNX15Q9NRS6 342 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 SH3BP4Q9P0V3 963 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 SPATA31A6Q5VVP1 1343 aa5.11□□□□□ -1.59
CD44-215ENST00000525241 PIP5K1BO14986 540 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 ZSCAN9O15535 394 aaPredicted RBP5.1□□□□□ -1.59
CD44-215ENST00000525241 FFAR2O15552 330 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 SUV39H1O43463 412 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 NHLRC4P0CG21 123 aaPredicted RBP5.1□□□□□ -1.59
CD44-215ENST00000525241 ADRA1DP25100 572 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 TNFAIP2Q03169 654 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 TFF2Q03403 129 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 KCNJ12Q14500 433 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 BCDIN3DQ7Z5W3 292 aaKnown RBP5.1□□□□□ -1.59
CD44-215ENST00000525241 LINC01465Q8N7H1 131 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.1□□□□□ -1.59
CD44-215ENST00000525241 PNPLA1Q8N8W4 532 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 PMM1Q92871 262 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 GRAMD1AQ96CP6 724 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 DAZAP1Q96EP5 407 aaKnown RBP5.1□□□□□ -1.59
CD44-215ENST00000525241 VPS50Q96JG6 964 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 MMS19Q96T76 1030 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 ASIC5Q9NY37 505 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 CA14Q9ULX7 337 aa5.1□□□□□ -1.59
CD44-215ENST00000525241 TCRBV5S1A1TA0A578 114 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms