RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 JAK3P52333 1124 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SP2Q02086 613 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CHSY1Q86X52 802 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ATXN7L3BQ96GX2 97 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 TRAPPC9Q96Q05 1148 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 PNPOQ9NVS9 261 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HERC5Q9UII4 1024 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 RPL26L1Q9UNX3 145 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 DNAJC16Q9Y2G8 782 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HBS1LQ9Y450 684 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 GJB1P08034 283 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 NR3C2P08235 984 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 GSTA2P09210 222 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 RBL1P28749 1068 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 INHBCP55103 352 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 KRT76Q01546 638 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ZC3H12AQ5D1E8 599 aaKnown RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 OXCT2Q9BYC2 517 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 CCDC160A6NGH7 325 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ABCG1P45844 678 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 PGGT1BP53609 377 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ACTR2P61160 394 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ROR1Q01973 937 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 TRIP10Q15642 601 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 GRAMD1BQ3KR37 738 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-202ENST00000524773 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 CRLF3Q8IUI8 442 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 OR6Y1Q8NGX8 325 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ATG4CQ96DT6 458 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 TUBB6Q9BUF5 446 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 ZNF358Q9NW07 568 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 PDP2Q9P2J9 529 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
CAPN1-202ENST00000524773 DGAT1O75907 488 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 TGDSO95455 350 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 C1QAP02745 245 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CPOXP36551 454 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 SCNN1BP51168 640 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 BTKQ06187 659 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 C6orf163Q5TEZ5 329 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 TTC39BQ5VTQ0 682 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ARHGAP24Q8N264 748 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 PPP1R16BQ96T49 567 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CEP41Q9BYV8 373 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 MMADHCQ9H3L0 296 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 KCNK4Q9NYG8 393 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CAPN8A6NHC0 703 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 A8MXQ7 604 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 MAGEC1O60732 1142 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 STIP1P31948 543 aaKnown RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ARRB2P32121 409 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ZNF132P52740 706 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CLDN10P78369 228 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CCNIQ14094 377 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 PPM1JQ5JR12 505 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CAND1Q86VP6 1230 aaKnown RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 ADGRF2Q8IZF7 708 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 CGRRF1Q99675 332 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 PDLIM7Q9NR12 457 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 DDX18Q9NVP1 670 aaKnown RBP13.66□□□□□ -0.22
CAPN1-202ENST00000524773 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
CAPN1-202ENST00000524773 SNRPAP09012 282 aaKnown RBP13.65□□□□□ -0.22
CAPN1-202ENST00000524773 CDK7P50613 346 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 MCCD1P59942 119 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-202ENST00000524773 DEUP1Q05D60 604 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 STX3Q13277 289 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 HIC1Q14526 733 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 TRNP1Q6NT89 227 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 WWP1Q9H0M0 922 aa13.65□□□□□ -0.22
CAPN1-202ENST00000524773 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms