RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 LRRC3BQ96PB8 259 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 MMS19Q96T76 1030 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 ACBD6Q9BR61 282 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 SRRTQ9BXP5 876 aaKnown RBP6.93□□□□□ -1.3
NUP98-213ENST00000524563 SLC46A2Q9BY10 475 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 XPO4Q9C0E2 1151 aaKnown RBP6.93□□□□□ -1.3
NUP98-213ENST00000524563 SDCBP2Q9H190 292 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 APOBEC3GQ9HC16 384 aaKnown RBP6.93□□□□□ -1.3
NUP98-213ENST00000524563 TMEM8AQ9HCN3 771 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 ABCB6Q9NP58 842 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 IMPACTQ9P2X3 320 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 NXF1Q9UBU9 619 aaKnown RBP6.93□□□□□ -1.3
NUP98-213ENST00000524563 ARMCX3Q9UH62 379 aaPredicted RBP6.93□□□□□ -1.3
NUP98-213ENST00000524563 RWDD2AQ9UIY3 292 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 INVSQ9Y283 1065 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 ATP8B3O60423 1300 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 CEP295Q9C0D2 2601 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 ACACAQ13085 2346 aa6.93□□□□□ -1.3
NUP98-213ENST00000524563 CCDC163A0A0D9SF12 145 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 SCAMP3O14828 347 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 TRIM66O15016 1216 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 KHNYNO15037 678 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 DCLK1O15075 740 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 MAP3K13O43283 966 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ATP2C2O75185 946 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 TADA3O75528 432 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 APODP05090 189 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 CYP2F1P24903 491 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 PMLP29590 882 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 WEE1P30291 646 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 HOXA6P31267 233 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 HOXC13P31276 330 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 GTF2H1P32780 548 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 GJA4P35212 333 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 GRIK1P39086 918 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 MAPK8P45983 427 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 LHX1P48742 406 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 FMO5P49326 533 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ATXN3P54252 364 aaPredicted RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 MARSP56192 900 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 ZNF268Q14587 947 aaPredicted RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 NCAPHQ15003 741 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 MAPRE1Q15691 268 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 ZNF77Q15935 545 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 SGSM1Q2NKQ1 1148 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 PLK5Q496M5 336 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 C2orf27AQ580R0 203 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 NAIF1Q69YI7 327 aaPredicted RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 NYAP1Q6ZVC0 841 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 MON1AQ86VX9 555 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 IRF2BP1Q8IU81 584 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 TRIM59Q8IWR1 403 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 PGBD3Q8N328 593 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ARL14EPQ8N8R7 260 aaPredicted RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 FBXL13Q8NEE6 735 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ANKRD20A12PQ8NF67 263 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 WHAMMQ8TF30 809 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 PIGKQ92643 395 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 TAF4BQ92750 862 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 SEMA4DQ92854 862 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 CNOT6LQ96LI5 555 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 NACA2Q9H009 215 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 SNX25Q9H3E2 840 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 DPEP3Q9H4B8 488 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ECT2Q9H8V3 914 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 METTL14Q9HCE5 456 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 TMEM9BQ9NQ34 198 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 POLR3BQ9NW08 1133 aaPredicted RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 FANCLQ9NW38 375 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 TRPM5Q9NZQ8 1165 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 HMGXB4Q9UGU5 601 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 GTF3C4Q9UKN8 822 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 NFE2L3Q9Y4A8 694 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 CKAP5Q14008 2032 aa6.92□□□□□ -1.3
NUP98-213ENST00000524563 ATXN2Q99700 1313 aaKnown RBP6.92□□□□□ -1.3
NUP98-213ENST00000524563 PTPRBP23467 1997 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 DNAH14Q0VDD8 3507 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 C2orf78A6NCI8 922 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 C4orf47A7E2U8 309 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 A8MXQ7 604 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 RIOK3O14730 519 aaKnown RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 SLC9A3R1O14745 358 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 ZBTB24O43167 697 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 STX10O60499 249 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 NOL4O94818 638 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 KCNK5O95279 499 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 KLF8O95600 359 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 GNA14O95837 355 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 ADH1CP00326 375 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 F11P03951 625 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 CFIP05156 583 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 PDGFRBP09619 1106 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 MBL2P11226 248 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 BDNFP23560 247 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 VASPP50552 380 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms