RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	LHX5	Q9H2C1	402 aa		10.65	□□□□□ -0.71
SPIDR-225	ENST00000524141	POPDC2	Q9HBU9	364 aa		10.65	□□□□□ -0.71
SPIDR-225	ENST00000524141	RAB6B	Q9NRW1	208 aa		10.65	□□□□□ -0.71
SPIDR-225	ENST00000524141	CASQ2	O14958	399 aa	Predicted RBP	10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	WDR46	O15213	610 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	MED7	O43513	233 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	TBC1D12	O60347	775 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	ASNS	P08243	561 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CD48	P09326	243 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	C6orf222	P0C671	652 aa	Predicted RBP	10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	VAV1	P15498	845 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CNTF	P26441	200 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CCND2	P30279	289 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	RANBP1	P43487	201 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	BTK	Q06187	659 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	EMC2	Q15006	297 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	PTPN20	Q4JDL3	420 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	SLC27A3	Q5K4L6	730 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	SWSAP1	Q6NVH7	229 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	ICA1L	Q8NDH6	482 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CMTM5	Q96DZ9	223 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	HAPLN2	Q9GZV7	340 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	SLC38A10	Q9HBR0	1119 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	PTTG2	Q9NZH5	202 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	COL11A2	P13942	1736 aa	Predicted RBP	10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	ADGRA2	Q96PE1	1338 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	MEI4	A8MW99	385 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CYB561D2	O14569	222 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	AQP4	P55087	323 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	PSMC1	P62191	440 aa	Known RBP	10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CNTN2	Q02246	1040 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	PDK3	Q15120	406 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	ZNF394	Q53GI3	561 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	SFT2D3	Q587I9	215 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	XKR3	Q5GH77	459 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	CES4A	Q5XG92	561 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	BRSK2	Q8IWQ3	736 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	JOSD2	Q8TAC2	188 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	HSPH1	Q92598	858 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	LPAR1	Q92633	364 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	RTP4	Q96DX8	246 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	EBF4	Q9BQW3	602 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141		Q9H521	79 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	SMYD3	Q9H7B4	428 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	MAD1L1	Q9Y6D9	718 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	KIAA1217	Q5T5P2	1943 aa		10.64	□□□□□ -0.71
SPIDR-225	ENST00000524141	LRRIQ4	A6NIV6	560 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	CXorf49	A8MYA2	514 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141		H7C0C1	242 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	AVIL	O75366	819 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TMCC1	O94876	653 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	MIP	P30301	263 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	SERPINB6	P35237	376 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	MAGEA6	P43360	314 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ATP5O	P48047	213 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TGFB2	P61812	414 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	SLC25A3	Q00325	362 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	LRRC36	Q1X8D7	754 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	RABGAP1L	Q5R372	815 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ZBTB41	Q5SVQ8	909 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PGM2L1	Q6PCE3	622 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	C4orf22	Q6V702	233 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TIFAB	Q6ZNK6	161 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TFAP2B	Q92481	460 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	DGCR14	Q96DF8	476 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ZBTB45	Q96K62	511 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	NRDE2	Q9H7Z3	1164 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	RAVER2	Q9HCJ3	691 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PCSK1N	Q9UHG2	260 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	CDH22	Q9UJ99	828 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	USP18	Q9UMW8	372 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	FAM189A1	O60320	539 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TRUB2	O95900	331 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PYGL	P06737	847 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ETS2	P15036	469 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ACAT1	P24752	427 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PEX2	P28328	305 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	L1CAM	P32004	1257 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	GABRB2	P47870	512 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	MSLN	Q13421	630 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	CCNI	Q14094	377 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TRIP10	Q15642	601 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	MTERF2	Q49AM1	385 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TMEM259	Q4ZIN3	620 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	POTEA	Q6S8J7	498 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	KIAA0319L	Q8IZA0	1049 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	SLC4A11	Q8NBS3	891 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	MCU	Q8NE86	351 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	GSDMB	Q8TAX9	411 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ACMSD	Q8TDX5	336 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PPP4R1	Q8TF05	950 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	LZIC	Q8WZA0	190 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	CDHR1	Q96JP9	859 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	TARS2	Q9BW92	718 aa	Known RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	C20orf27	Q9GZN8	174 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	PORCN	Q9H237	461 aa		10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.63	□□□□□ -0.71
SPIDR-225	ENST00000524141	JPH1	Q9HDC5	661 aa	Predicted RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms