RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PWWP2AQ96N64 755 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TTC25Q96NG3 672 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 DHRS4Q9BTZ2 278 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 RAB6BQ9NRW1 208 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TOPORSQ9NS56 1045 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ANKEF1Q9NU02 776 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 RAB20Q9NX57 234 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TOR4AQ9NXH8 423 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 NKIRAS1Q9NYS0 192 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SENP1Q9P0U3 644 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 KLHL14Q9P2G3 628 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 GRID1Q9ULK0 1009 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 EXOC7Q9UPT5 735 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TELO2Q9Y4R8 837 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 LRRC42Q9Y546 428 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 NRCAMQ92823 1304 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ANK1P16157 1881 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TCRBV5S1A1TA0A578 114 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 LINC01553A4QN01 128 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 GOLGA8IPA6NC78 632 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 GOLGA8JA6NMD2 632 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 MEN1O00255 615 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ABLIM1O14639 778 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 SLC16A4O15374 487 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TYROBPO43914 113 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 LILRA1O75019 489 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ADH1AP07327 375 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 RPSAP08865 295 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 CTSHP09668 335 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TPBGLP0DKB5 382 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 RALAP11233 206 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 BMP1P13497 986 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 KCNA2P16389 499 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ACO1P21399 889 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 IBSPP21815 317 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 GCKP35557 465 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TCF7P36402 384 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 MAGEA4P43358 317 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 QARSP47897 775 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 NOMO3P69849 1222 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 IRX1P78414 480 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ATP11AP98196 1134 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 RELBQ01201 579 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 NAA25Q14CX7 972 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TMED2Q15363 201 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ZC3H12AQ5D1E8 599 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 WASHC2DQ5SRD0 308 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 MIS18BP1Q6P0N0 1132 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 SPRED2Q7Z698 418 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 PRUNE1Q86TP1 453 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 PHF13Q86YI8 300 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 SRRM1Q8IYB3 904 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF276Q8N554 614 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 UBR7Q8N806 425 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 FAM13CQ8NE31 585 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 EXD1Q8NHP7 514 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 BSNDQ8WZ55 320 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 THOC1Q96FV9 657 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 CFAP57Q96MR6 1250 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 UHRF1Q96T88 793 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 CCDC77Q9BR77 488 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 OSBPL8Q9BZF1 889 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 SMARCAD1Q9H4L7 1026 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 KIAA1586Q9HCI6 787 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 MLXIPLQ9NP71 852 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 KCNK9Q9NPC2 374 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 DNAJC17Q9NVM6 304 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 ERAP1Q9NZ08 941 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 NKX1-2Q9UD57 310 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 FETUBQ9UGM5 382 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 LNPEPQ9UIQ6 1025 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 TBX20Q9UMR3 447 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 SMG5Q9UPR3 1016 aaKnown RBP8.18□□□□□ -1.1
SPIDR-223ENST00000524033 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
SPIDR-223ENST00000524033 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 GSTTP1A0A1W2PQM5 241 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 C2CD2LO14523 706 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 LIASO43766 372 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 LPXNO60711 386 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 HNRNPCL1O60812 293 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 DCTN3O75935 186 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 STBD1O95210 358 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 LUC7L3O95232 432 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 LINGO3P0C6S8 592 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 GM2AP17900 193 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 GARTP22102 1010 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 CALB2P22676 271 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 MARK3P27448 753 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 PEX3P56589 373 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ERVK-21P61565 698 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 ADAM17P78536 824 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SPARCL1Q14515 664 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 TRIP13Q15645 432 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 OASLQ15646 514 aaKnown RBP8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SLC1A5Q15758 541 aa8.17□□□□□ -1.1
SPIDR-223ENST00000524033 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms