RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	DDX10	Q13206	875 aa	Known RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	TBX2	Q13207	712 aa	Predicted RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	APOA5	Q6Q788	366 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	MYCT1	Q8N699	235 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	KLHDC4	Q8TBB5	520 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	DDB2	Q92466	427 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	ZC3H10	Q96K80	434 aa	Known RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	C22orf23	Q9BZE7	217 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	STARD7	Q9NQZ5	370 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	CALCOCO1	Q9P1Z2	691 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	ADAM21	Q9UKJ8	722 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	STXBP5L	Q9Y2K9	1186 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	KANK1	Q14678	1352 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655		A0A088AWK7	358 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655		A0A1B0GVC2	190 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	FOXN3	O00409	490 aa	Predicted RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	POLRMT	O00411	1230 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	MPPED1	O15442	326 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	PROM1	O43490	865 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	EPB41L2	O43491	1005 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	NCK2	O43639	380 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	HSPA8	P11142	646 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	GRIA3	P42263	894 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	NPTX2	P47972	431 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF543	Q08ER8	600 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	PPFIA1	Q13136	1202 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	FAM209B	Q5JX69	171 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	L1TD1	Q5T7N2	865 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	TAF2	Q6P1X5	1199 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	COL23A1	Q86Y22	540 aa	Predicted RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	SH2D3C	Q8N5H7	860 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	NEUROD6	Q96NK8	337 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	HEPH	Q9BQS7	1158 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	BRD9	Q9H8M2	597 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	KMT5A	Q9NQR1	393 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	DKK3	Q9UBP4	350 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	GJD2	Q9UKL4	321 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	NR2E3	Q9Y5X4	410 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	LRRFIP2	Q9Y608	721 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	TECPR2	O15040	1411 aa		5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	RRBP1	Q9P2E9	1410 aa	Known RBP	5.45	□□□□□ -1.54
SREK1-213	ENST00000523655	TULP4	Q9NRJ4	1543 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655		M0R3H8	397 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	TIMM44	O43615	452 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF500	O60304	480 aa	Predicted RBP	5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	RNASEH2A	O75792	299 aa	Known RBP	5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	KIF20A	O95235	890 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	PDHA1	P08559	390 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	MAPK9	P45984	424 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF135	P52742	658 aa	Predicted RBP	5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ICA1	Q05084	483 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	BOP1	Q14137	746 aa	Known RBP	5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	KCTD2	Q14681	263 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ZNF788	Q6ZQV5	615 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	MICALCL	Q6ZW33	695 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	PRAG1	Q86YV5	1406 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	B3GALNT2	Q8NCR0	500 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	PLBD2	Q8NHP8	589 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	POC1B	Q8TC44	478 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	BRI3BP	Q8WY22	251 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	TRIM63	Q969Q1	353 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	TMEM41A	Q96HV5	264 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	CDK5RAP3	Q96JB5	506 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	PPM1M	Q96MI6	270 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	UROC1	Q96N76	676 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	SMO	Q99835	787 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	LRRC27	Q9C0I9	530 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ATP6V0A4	Q9HBG4	840 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ETAA1	Q9NY74	926 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	CORO2B	Q9UQ03	480 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	CFAP20	Q9Y6A4	193 aa	Known RBP	5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	ADGRA2	Q96PE1	1338 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	MYO5B	Q9ULV0	1848 aa		5.44	□□□□□ -1.54
SREK1-213	ENST00000523655	CCDC144A	A2RUR9	1427 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TNS3	Q68CZ2	1445 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	RGPD3	A6NKT7	1758 aa	Predicted RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	RGPD4	Q7Z3J3	1758 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	MANSC4	A6NHS7	340 aa	Predicted RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655		F5H697	171 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	ADAMTS3	O15072	1205 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	FGF18	O76093	207 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	SMARCA1	P28370	1054 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	PRDX5	P30044	214 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TEC	P42680	631 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	ABCG1	P45844	678 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	STT3A	P46977	705 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TOB1	P50616	345 aa	Predicted RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	MAP2K6	P52564	334 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	POU6F2	P78424	691 aa	Predicted RBP	5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	NHLH1	Q02575	133 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	PIGF	Q07326	219 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	FOXF2	Q12947	444 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	BLMH	Q13867	455 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	PTPRR	Q15256	657 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	CCDC38	Q502W7	563 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	PPP4R3A	Q6IN85	833 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TTC7B	Q86TV6	843 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	RASAL3	Q86YV0	1011 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	ANKRD18A	Q8IVF6	992 aa		5.43	□□□□□ -1.54
SREK1-213	ENST00000523655	TCP11L2	Q8N4U5	519 aa		5.43	□□□□□ -1.54

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