RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 C2CD4BA6NLJ0 364 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 SLC38A8A6NNN8 435 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 SART1O43290 800 aaKnown RBP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 FBXO21O94952 628 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 CAMK1Q14012 370 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 PIGHQ14442 188 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 ZDHHC17Q8IUH5 632 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 OSBPL9Q96SU4 736 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 CNPY3Q9BT09 278 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 MAN1C1Q9NR34 630 aa9.77□□□□□ -0.85
SDCBP-212ENST00000523483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.77□□□□□ -0.85
SDCBP-212ENST00000523483 EPOPA6NHQ4 379 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 LRCH4O75427 683 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 KRT1P04264 644 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MYL4P12829 197 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 IGFBP4P22692 258 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MIPP30301 263 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ZNF143P52747 638 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 DEUP1Q05D60 604 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 SMARCB1Q12824 385 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 HADHQ16836 314 aaKnown RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 CCDC14Q49A88 953 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 PPM1LQ5SGD2 360 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 TPGS2Q68CL5 300 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 C12orf76Q8N812 135 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ALG3Q92685 438 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ABCB6Q9NP58 842 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 TMPRSS4Q9NRS4 437 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 SMPD4Q9NXE4 827 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 TMEM59LQ9UK28 342 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 V9GYY5 206 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 RB1P06400 928 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MATKP42679 507 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 DYNLT1P63172 113 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MEI1Q5TIA1 1274 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 C11orf63Q6NUN7 778 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 DNAJB7Q7Z6W7 309 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MNS1Q8NEH6 495 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 OXCT2Q9BYC2 517 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 SIK2Q9H0K1 926 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 PIDD1Q9HB75 910 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 USP18Q9UMW8 372 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 SNX12Q9UMY4 172 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 H3BNC9 293 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ABLIM3O94929 683 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 MAGEA11P43364 429 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 NUMBP49757 651 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ERVK-21P61565 698 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 TMC5Q6UXY8 1006 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ELMOD1Q8N336 334 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 ST13P5Q8NFI4 369 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.855e-6■■■■□ 22.3
SDCBP-212ENST00000523483 CARD6Q9BX69 1037 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 DHX35Q9H5Z1 703 aaKnown RBP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 CCSER2Q9H7U1 834 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.76□□□□□ -0.85
SDCBP-212ENST00000523483 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 HCFC2Q9Y5Z7 792 aa9.76□□□□□ -0.85
SDCBP-212ENST00000523483 TCRBV5S1A1TA0A578 114 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TNFRSF10BO14763 440 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 RTN3O95197 1032 aaPredicted RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 IRF1P10914 325 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 MRPS25P82663 173 aaKnown RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 CREMQ03060 361 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 RHOT1Q8IXI2 618 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 C2orf15Q8WU43 125 aaKnown RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 HAUS1Q96CS2 278 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 FAM118BQ9BPY3 351 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 HINFPQ9BQA5 517 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 PRDM12Q9H4Q4 367 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TLR8Q9NR97 1041 aaKnown RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 HCFC1R1Q9NWW0 138 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 OSER1Q9NX31 292 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TSC2P49815 1807 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TLR5O60602 858 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 TRUB2O95900 331 aaKnown RBP9.75□□□□□ -0.85
SDCBP-212ENST00000523483 EFEMP2O95967 443 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 RARGP13631 454 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 IL1R2P27930 398 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 GABRR2P28476 465 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 NOS2P35228 1153 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 RWDD2BP57060 319 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 KRT81Q14533 505 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 RAB41Q5JT25 222 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 KCTD6Q8NC69 237 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 AP1M1Q9BXS5 423 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 ADAM33Q9BZ11 813 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 MAGEB5Q9BZ81 275 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 REV3LO60673 3130 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 CREB3O43889 395 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 FGGP02679 453 aa9.75□□□□□ -0.85
SDCBP-212ENST00000523483 CSH1P0DML2 217 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms