RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RGL4Q8IZJ4 473 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 TRIML1Q8N9V2 468 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 KCNV2Q8TDN2 545 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 BHMTQ93088 406 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 HSPA12BQ96MM6 686 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 BBS2Q9BXC9 721 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 SLC6A17Q9H1V8 727 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 BLZF1Q9H2G9 400 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 MSRB2Q9Y3D2 182 aa27.44■■□□□ 1.98
PVT1-219ENST00000523427 SPEGQ15772 3267 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 A0A1W2PQF6 199 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 TLR5O60602 858 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 STAU1O95793 577 aaKnown RBP27.43■■□□□ 1.98
PVT1-219ENST00000523427 NDUFV2P19404 249 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 RDXP35241 583 aaKnown RBP27.43■■□□□ 1.98
PVT1-219ENST00000523427 HOXD12P35452 270 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 PEAR1Q5VY43 1037 aaPredicted RBP27.43■■□□□ 1.98
PVT1-219ENST00000523427 SLC41A1Q8IVJ1 513 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 IPO4Q8TEX9 1081 aaKnown RBP27.43■■□□□ 1.98
PVT1-219ENST00000523427 JAKMIP2Q96AA8 810 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 TNIP3Q96KP6 325 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 SDCBP2Q9H190 292 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 CAPN10Q9HC96 672 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 SLC39A2Q9NP94 309 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 CD93Q9NPY3 652 aa27.43■■□□□ 1.98
PVT1-219ENST00000523427 SPTLC2O15270 562 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 BEST1O76090 585 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 NASPP49321 788 aaPredicted RBP27.42■■□□□ 1.98
PVT1-219ENST00000523427 SNX30Q5VWJ9 437 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 TOGARAM2Q6ZUX3 1019 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 FUKQ8N0W3 1084 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 IQUBQ8NA54 791 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 LINC00301Q8NCQ3 95 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 PLEKHO2Q8TD55 490 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 CAMK1GQ96NX5 476 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 XPO6Q96QU8 1125 aaKnown RBP27.42■■□□□ 1.98
PVT1-219ENST00000523427 SMOQ99835 787 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 CUEDC2Q9H467 287 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 IL37Q9NZH6 218 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 LHX6Q9UPM6 363 aa27.42■■□□□ 1.98
PVT1-219ENST00000523427 ARHGAP33O14559 1287 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 ZDHHC11BP0C7U3 371 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 TYRP14679 529 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 TUBP50607 506 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 MAP3K7CLP57077 242 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 RING1Q06587 406 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 NCOA4Q13772 614 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 ZMIZ2Q8NF64 920 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 SLC2A14Q8TDB8 520 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 FAM49BQ9NUQ9 324 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 CACNA2D2Q9NY47 1150 aa27.41■■□□□ 1.98
PVT1-219ENST00000523427 MORC2Q9Y6X9 1032 aaPredicted RBP27.41■■□□□ 1.98
PVT1-219ENST00000523427 PRRT4C9JH25 899 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 NDUFS2O75306 463 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 ZNF217O75362 1048 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 MAOBP27338 520 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 PLEKHG6Q3KR16 790 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 KIAA1324Q6UXG2 1013 aaKnown RBP27.4■■□□□ 1.98
PVT1-219ENST00000523427 UNC13DQ70J99 1090 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 C7orf25Q9BPX7 421 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 ZSCAN16Q9H4T2 348 aaPredicted RBP27.4■■□□□ 1.98
PVT1-219ENST00000523427 TLR8Q9NR97 1041 aaKnown RBP27.4■■□□□ 1.98
PVT1-219ENST00000523427 NUDT5Q9UKK9 219 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 STARD13Q9Y3M8 1113 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 UBE4BO95155 1302 aa27.4■■□□□ 1.98
PVT1-219ENST00000523427 CEP192Q8TEP8 1941 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 UPK3BL1B0FP48 263 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 UPK3BL2E5RIL1 263 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 SYPP08247 313 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 CD59P13987 128 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 ADORA2BP29275 332 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 SNRPFP62306 86 aaKnown RBP27.39■■□□□ 1.98
PVT1-219ENST00000523427 HTR3DQ70Z44 454 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 RABEPKQ7Z6M1 372 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 KLF16Q9BXK1 252 aaPredicted RBP27.39■■□□□ 1.98
PVT1-219ENST00000523427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.39■■□□□ 1.982e-7■■■■■ 61.4
PVT1-219ENST00000523427 COMMD8Q9NX08 183 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 PLK2Q9NYY3 685 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 HMGXB4Q9UGU5 601 aa27.39■■□□□ 1.98
PVT1-219ENST00000523427 LSM7Q9UK45 103 aaKnown RBP27.39■■□□□ 1.98
PVT1-219ENST00000523427 PLXND1Q9Y4D7 1925 aa27.39■■□□□ 1.97
PVT1-219ENST00000523427 LRRIQ3A6PVS8 624 aaPredicted RBP27.38■■□□□ 1.97
PVT1-219ENST00000523427 WASH3PC4AMC7 463 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 MDM4O15151 490 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 SH3BP5O60239 455 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 AFMP43652 599 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 FOXD4L5Q5VV16 416 aaPredicted RBP27.38■■□□□ 1.97
PVT1-219ENST00000523427 SHC4Q6S5L8 630 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 C12orf29Q8N999 325 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 FOXD4L4Q8WXT5 416 aaPredicted RBP27.38■■□□□ 1.97
PVT1-219ENST00000523427 FBXO44Q9H4M3 255 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 WDR35Q9P2L0 1181 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 PCDHB9Q9Y5E1 797 aa27.38■■□□□ 1.97
PVT1-219ENST00000523427 FAM92AA1XBS5 289 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 H0Y626 953 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 POLR2DO15514 142 aaKnown RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 STX6O43752 255 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 TRIM16O95361 564 aa27.37■■□□□ 1.97
PVT1-219ENST00000523427 ATP5C1P36542 298 aaKnown RBP27.37■■□□□ 1.97
PVT1-219ENST00000523427 NDST1P52848 882 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms