RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 LRRC43Q8N309 656 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CCNYL1Q8N7R7 359 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 DCUN1D1Q96GG9 259 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 DNAJB4Q9UDY4 337 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CACNA1SQ13698 1873 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 SERPINE1P05121 402 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 FGFR1P11362 822 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 EEF1B2P24534 225 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 GCAP28676 217 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 TM4SF1P30408 202 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ADRM1Q16186 407 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CCDC92Q53HC0 331 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 NPNTQ6UXI9 565 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 AFAP1L2Q8N4X5 818 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CDRT15Q96T59 188 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 FRMD8Q9BZ67 464 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 UPF3AQ9H1J1 476 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CDH22Q9UJ99 828 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 TCRBV7S3A2A0A539 114 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 APOEP02649 317 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 BPGMP07738 259 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CFHP08603 1231 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PABPC4LP0CB38 370 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 THRAP10827 490 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 KDELR1P24390 212 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 MSX2P35548 267 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 CDKN2BP42772 138 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 NRLP54845 237 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 NLRP11P59045 1033 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 FAM47CQ5HY64 1035 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 TXNRD3NBQ6F5E7 133 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 BBS12Q6ZW61 710 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PDSS2Q86YH6 399 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 PQLC1Q8N2U9 271 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 MRPS26Q9BYN8 205 aaKnown RBP9.34□□□□□ -0.91
CSMD1-212ENST00000523387 MAN1C1Q9NR34 630 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 DMTF1Q9Y222 760 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 SPATA31A1Q5TZJ5 1347 aa9.34□□□□□ -0.91
CSMD1-212ENST00000523387 ZNF142P52746 1687 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 SYNJ2BP-COX16A0A087WUM0 186 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 RNF103-CHMP3A0A140T963 221 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 APOC4-APOC2K7ER74 178 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 APOC2P02655 101 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ITGB5P18084 799 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ABCD1P33897 745 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 SFSWAPQ12872 951 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ORC1Q13415 861 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NRF1Q16656 503 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 DRICH1Q6PGQ1 229 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 PATL1Q86TB9 770 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 SNX32Q86XE0 403 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 CDKL3Q8IVW4 592 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 GPATCH2LQ9NWQ4 482 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 COX16Q9P0S2 106 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 C10orf71Q711Q0 1435 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF189O75820 626 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 TSHRP16473 764 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NELFEP18615 380 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NR1H2P55055 460 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 DLGAP5Q15398 846 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 C1orf220Q5T0J3 134 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZBTB8OSQ8IWT0 167 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 KYQ8NBH2 561 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 PGBD4Q96DM1 585 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 GCOM2Q9BZD3 368 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 CISHQ9NSE2 258 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 PNPOQ9NVS9 261 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 MID2Q9UJV3 735 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 FEM1BQ9UK73 627 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 POMPQ9Y244 141 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 TTLL3Q9Y4R7 772 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 AK5Q9Y6K8 562 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NUP98P52948 1817 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZFXP17010 805 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-212ENST00000523387 GRK2P25098 689 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ADSSP30520 456 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 MYBPC3Q14896 1274 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 ZACNQ401N2 412 aa9.33□□□□□ -0.92
CSMD1-212ENST00000523387 NADK2Q4G0N4 442 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms