RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 XXYLT1Q8NBI6 393 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 IPO4Q8TEX9 1081 aaKnown RBP24.08■■□□□ 1.45
PVT1-218ENST00000523328 SYAP1Q96A49 352 aaPredicted RBP24.08■■□□□ 1.45
PVT1-218ENST00000523328 HSPA12BQ96MM6 686 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 LRRC27Q9C0I9 530 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 VRTNQ9H8Y1 702 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 COMMD8Q9NX08 183 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 ATP8B3O60423 1300 aa24.08■■□□□ 1.44
PVT1-218ENST00000523328 NBEAQ8NFP9 2946 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 A0A1W2PQD8 194 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 GJB3O75712 270 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 RDXP35241 583 aaKnown RBP24.07■■□□□ 1.44
PVT1-218ENST00000523328 FAM26FQ5R3K3 315 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 GRAMD4Q6IC98 578 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 HTR3DQ70Z44 454 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 TRIML1Q8N9V2 468 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 ZMIZ2Q8NF64 920 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 SMARCD1Q96GM5 515 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 GABRG3Q99928 467 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 MED10Q9BTT4 135 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 CD93Q9NPY3 652 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 DNAJC17Q9NVM6 304 aaKnown RBP24.07■■□□□ 1.44
PVT1-218ENST00000523328 CYP8B1Q9UNU6 501 aa24.07■■□□□ 1.44
PVT1-218ENST00000523328 PRRT4C9JH25 899 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 CACNG3O60359 315 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 SNRPFP62306 86 aaKnown RBP24.06■■□□□ 1.44
PVT1-218ENST00000523328 ASIC1P78348 528 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 HNRNPDQ14103 355 aaKnown RBP24.06■■□□□ 1.44
PVT1-218ENST00000523328 ZNF423Q2M1K9 1284 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 CNNM4Q6P4Q7 775 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 NELFCDQ8IXH7 590 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 CHPFQ8IZ52 775 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 FUKQ8N0W3 1084 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 SCFD1Q8WVM8 642 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 ERLEC1Q96DZ1 483 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 KRT82Q9NSB4 513 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 ADAMTS20P59510 1910 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 PLXNB3Q9ULL4 1909 aa24.06■■□□□ 1.44
PVT1-218ENST00000523328 NEDD8-MDP1E9PL57 170 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 TLR5O60602 858 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 SYPP08247 313 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 NASPP49321 788 aaPredicted RBP24.05■■□□□ 1.44
PVT1-218ENST00000523328 EHHADHQ08426 723 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 ACAP1Q15027 740 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 PROSER1Q86XN7 944 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 PLEKHO2Q8TD55 490 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 ZNF419Q96HQ0 510 aaPredicted RBP24.05■■□□□ 1.44
PVT1-218ENST00000523328 TNIP3Q96KP6 325 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 CAMK1GQ96NX5 476 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 SMOQ99835 787 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 KLF16Q9BXK1 252 aaPredicted RBP24.05■■□□□ 1.44
PVT1-218ENST00000523328 NACA2Q9H009 215 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 SDCBP2Q9H190 292 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 CUEDC2Q9H467 287 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 MARK1Q9P0L2 795 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 UBE4BO95155 1302 aa24.05■■□□□ 1.44
PVT1-218ENST00000523328 LAMA5O15230 3695 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 AP1G2O75843 785 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 BEST1O76090 585 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 TBX18O95935 607 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 TYRP14679 529 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 CASP4P49662 377 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 SLC14A1Q13336 389 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 SDE2Q6IQ49 451 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 TOGARAM2Q6ZUX3 1019 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 C12orf56Q8IXR9 622 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 ELMO3Q96BJ8 720 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 MRGPRX1Q96LB2 322 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 XPO6Q96QU8 1125 aaKnown RBP24.04■■□□□ 1.44
PVT1-218ENST00000523328 BBS2Q9BXC9 721 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 SLC6A17Q9H1V8 727 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 UPF2Q9HAU5 1272 aaKnown RBP24.04■■□□□ 1.44
PVT1-218ENST00000523328 RAD54BQ9Y620 910 aa24.04■■□□□ 1.44
PVT1-218ENST00000523328 ZBTB24O43167 697 aaPredicted RBP24.03■■□□□ 1.44
PVT1-218ENST00000523328 SH3BP5O60239 455 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 PHACTR2O75167 634 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 AMPD3Q01432 767 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 ZNF699Q32M78 642 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 ZNF667Q5HYK9 610 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 SCARA5Q6ZMJ2 495 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 TPGS1Q6ZTW0 290 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 ACOT1Q86TX2 421 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 CSNK1G1Q9HCP0 422 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 MTMR6Q9Y217 621 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 ITPR1Q14643 2758 aa24.03■■□□□ 1.44
PVT1-218ENST00000523328 CCDC130P13994 396 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 TRIP6Q15654 476 aaKnown RBP24.02■■□□□ 1.44
PVT1-218ENST00000523328 PLEKHG6Q3KR16 790 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 RGL4Q8IZJ4 473 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 LINC00301Q8NCQ3 95 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 DHX58Q96C10 678 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 C7orf25Q9BPX7 421 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 FBXO44Q9H4M3 255 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 FAM124BQ9H5Z6 455 aaPredicted RBP24.02■■□□□ 1.44
PVT1-218ENST00000523328 CYLDQ9NQC7 956 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 TLR8Q9NR97 1041 aaKnown RBP24.02■■□□□ 1.44
PVT1-218ENST00000523328 CACNA2D2Q9NY47 1150 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 WDR35Q9P2L0 1181 aa24.02■■□□□ 1.44
PVT1-218ENST00000523328 NDUFS2O75306 463 aa24.01■■□□□ 1.43
PVT1-218ENST00000523328 CISD3P0C7P0 127 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms