RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 HDAC4P56524 1084 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 USP46P62068 366 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 YWHAZP63104 245 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 MRPS25P82663 173 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 ITIH3Q06033 890 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 DUSP4Q13115 394 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 DCAF6Q58WW2 860 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 KCNT1Q5JUK3 1230 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 C9orf50Q5SZB4 431 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 SYPL2Q5VXT5 272 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 PM20D1Q6GTS8 502 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SLC8B1Q6J4K2 584 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 MFSD7Q6UXD7 560 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SPOCD1Q6ZMY3 1216 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CYP4V2Q6ZWL3 525 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 ARCQ7LC44 396 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 POLNQ7Z5Q5 900 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 ANKS1BQ7Z6G8 1248 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SLC13A5Q86YT5 568 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 VPS52Q8N1B4 723 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 NUP93Q8N1F7 819 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SCML4Q8N228 414 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 PDCD7Q8N8D1 485 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 KLHL23Q8NBE8 558 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 EXD1Q8NHP7 514 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 PHOSPHO2Q8TCD6 241 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SP7Q8TDD2 431 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 GIPC2Q8TF65 315 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 C2orf15Q8WU43 125 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 IRGQQ8WZA9 623 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 RAPGEF5Q92565 580 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 HSPH1Q92598 858 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 EDEM1Q92611 657 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 RBM41Q96IZ5 413 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 C8orf48Q96LL4 319 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SLITRK1Q96PX8 696 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 KRT12Q99456 494 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 NPY6RQ99463 290 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CLSTN3Q9BQT9 956 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 RHOXF2Q9BQY4 288 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 C11orf84Q9BUA3 381 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 SNRNP25Q9BV90 132 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 PLVAPQ9BX97 442 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 ZBP1Q9H171 429 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 MTIF3Q9H2K0 278 aaKnown RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 COX16Q9P0S2 106 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CALCOCO1Q9P1Z2 691 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 STAP1Q9ULZ2 295 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 NAALADL1Q9UQQ1 740 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 NR2E1Q9Y466 385 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 USP3Q9Y6I4 520 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 MYO16Q9Y6X6 1858 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 COL4A4P53420 1690 aaPredicted RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 hCG_1818297A0A087WSY0 165 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 A0A1W2PQH9 124 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 CCDC85CA6NKD9 419 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SLC38A8A6NNN8 435 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 GRXCR1A8MXD5 290 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 CCDC188H7C350 402 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 M0QYT0 321 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 ARHGEF15O94989 841 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SEC24AO95486 1093 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 CD48P09326 243 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 CTSAP10619 480 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 NCAM1P13591 858 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 KRT10P13645 584 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 ATF6P18850 670 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 RDXP35241 583 aaKnown RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 MAGEA10P43363 369 aaPredicted RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 PGFP49763 221 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 YWHAGP61981 247 aaKnown RBP eCLIP7.01□□□□□ -1.29
PVT1-217ENST00000523190 RPL10AP62906 217 aaKnown RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 KRT17Q04695 432 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 DEUP1Q05D60 604 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SMARCB1Q12824 385 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 NME3Q13232 169 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 MTMR3Q13615 1198 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SIX1Q15475 284 aaPredicted RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 CA9Q16790 459 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SLC25A52Q3SY17 297 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 ODF2Q5BJF6 829 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 ZC3H12AQ5D1E8 599 aaKnown RBP7.01□□□□□ -1.29
PVT1-217ENST00000523190 RASIP1Q5U651 963 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 BSPRYQ5W0U4 402 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 BTBD8Q5XKL5 378 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 KAZNQ674X7 775 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 C8orf74Q6P047 294 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 DENND5BQ6ZUT9 1274 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 STRADAQ7RTN6 431 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SPRED2Q7Z698 418 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 SCD5Q86SK9 330 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 FAM131BQ86XD5 332 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 RCOR2Q8IZ40 523 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 ZDHHC14Q8IZN3 488 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 CCDC185Q8N715 623 aa7.01□□□□□ -1.29
PVT1-217ENST00000523190 PRELID2Q8N945 189 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms