RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CLUL1Q15846 466 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 PRSS36Q5K4E3 855 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 SNX30Q5VWJ9 437 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 ARHGAP18Q8N392 663 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 EMC1Q8N766 993 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 MCEEQ96PE7 176 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 ATXN3LQ9H3M9 355 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 POPDC2Q9HBU9 364 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 ABCC13Q9NSE7 274 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 PYCARDQ9ULZ3 195 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 OBSL1O75147 1896 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 H3BQ06 376 aaPredicted RBP17.03■□□□□ 0.32
LSM1-204ENST00000522515 CCDC175P0C221 793 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 CDC25CP30307 473 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 FLT3P36888 993 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 PPP3CCP48454 512 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 SYPL2Q5VXT5 272 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 BTBD8Q5XKL5 378 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 CES5AQ6NT32 575 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 TRNP1Q6NT89 227 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 DEFB106AQ8N104 65 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 SMRP1Q8NCR6 262 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 SHKBP1Q8TBC3 707 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 NUP85Q9BW27 656 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 UBE2ZQ9H832 354 aaPredicted RBP17.03■□□□□ 0.32
LSM1-204ENST00000522515 MRPL47Q9HD33 250 aaKnown RBP17.03■□□□□ 0.32
LSM1-204ENST00000522515 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
LSM1-204ENST00000522515 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 CTTNBP2NLQ9P2B4 639 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 NUDT5Q9UKK9 219 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 COG5Q9UP83 839 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 NAALADL1Q9UQQ1 740 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 PPP2R2CQ9Y2T4 447 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 DUSP10Q9Y6W6 482 aa17.03■□□□□ 0.32
LSM1-204ENST00000522515 C2orf78A6NCI8 922 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 PJA2O43164 708 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 FGF19O95750 216 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 NCAM1P13591 858 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 RARGP13631 454 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 KCNA5P22460 613 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 ATAT1Q5SQI0 421 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 STXBP5Q5T5C0 1151 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 DCUN1D2Q6PH85 259 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 ITFG1Q8TB96 612 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 RFFLQ8WZ73 363 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 SLC2A13Q96QE2 648 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 GCNAQ96QF7 691 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
LSM1-204ENST00000522515 OSGEPQ9NPF4 335 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 TRIM10Q9UDY6 481 aa17.02■□□□□ 0.32
LSM1-204ENST00000522515 MRPS23Q9Y3D9 190 aaKnown RBP17.02■□□□□ 0.32
LSM1-204ENST00000522515 ANAPC1Q9H1A4 1944 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 TMEM191CA6NGB0 347 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 ZNF197O14709 1029 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 CAPN9O14815 690 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 TLR5O60602 858 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 DAB1O75553 588 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 TEAD2Q15562 447 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 DCAF6Q58WW2 860 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 ARCQ7LC44 396 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 ZNF564Q8TBZ8 553 aaPredicted RBP17.02■□□□□ 0.31
LSM1-204ENST00000522515 MRPS31Q92665 395 aaKnown RBP17.02■□□□□ 0.31
LSM1-204ENST00000522515 CD207Q9UJ71 328 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.31
LSM1-204ENST00000522515 DENND4CQ5VZ89 1909 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 C2CD4BA6NLJ0 364 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 TBX18O95935 607 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 OAS1P00973 400 aaKnown RBP17.01■□□□□ 0.31
LSM1-204ENST00000522515 RALAP11233 206 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 CEBPBP17676 345 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 FSHRP23945 695 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 NOS2P35228 1153 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 MATKP42679 507 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 PITX1P78337 314 aaPredicted RBP17.01■□□□□ 0.31
LSM1-204ENST00000522515 OGDHQ02218 1023 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 KIF5AQ12840 1032 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 TCEAL1Q15170 157 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 HECTD3Q5T447 861 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 POTEHQ6S545 545 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 BEND5Q7L4P6 421 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 RHOT2Q8IXI1 618 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 MAB21L3Q8N8X9 362 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 RXFP2Q8WXD0 754 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 ING5Q8WYH8 240 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 HLA-CQ95604 372 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 RIPOR3Q96MK2 946 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 CFAP57Q96MR6 1250 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 SLC22A12Q96S37 553 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 DDX23Q9BUQ8 820 aaKnown RBP17.01■□□□□ 0.31
LSM1-204ENST00000522515 TRIM62Q9BVG3 475 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 TRPC7Q9HCX4 862 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.01■□□□□ 0.31
LSM1-204ENST00000522515 UVRAGQ9P2Y5 699 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 BRWD1Q9NSI6 2320 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms