RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 IGFBP4P22692 258 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 SOX10P56693 466 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 OTUD4Q01804 1114 aaKnown RBP16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 CNTN1Q12860 1018 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF438Q7Z4V0 828 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 CCT8L2Q96SF2 557 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 SEMA6BQ9H3T3 888 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 GAKO14976 1311 aa16.77■□□□□ 0.27
PCDHA3-201ENST00000522353 PDHA1P08559 390 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 MAPK1P28482 360 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 BEX3Q00994 111 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ILF2Q12905 390 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 MAPK7Q13164 816 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 GRAMD4Q6IC98 578 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF473Q8WTR7 871 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 FAR2Q96K12 515 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF558Q96NG5 402 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 OSGEPL1Q9H4B0 414 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 H2AFY2Q9P0M6 372 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 NCKAP1Q9Y2A7 1128 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 LRRC23Q53EV4 343 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 BBS7Q8IWZ6 715 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 SH2D3CQ8N5H7 860 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CYP2W1Q8TAV3 490 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ZFP42Q96MM3 310 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 DNAJC7Q99615 494 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CELF4Q9BZC1 486 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ATP13A1Q9HD20 1204 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 GLRA3O75311 464 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 SUPT7LO94864 414 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF268Q14587 947 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 MKL1Q969V6 931 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 KLF6Q99612 283 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 RBM22Q9NW64 420 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CACNA2D2Q9NY47 1150 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 FRMPD4Q14CM0 1322 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 RBAK-RBAKDNI3L0D1 243 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 EIF3HO15372 352 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CYP3A4P08684 503 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 CREMQ03060 361 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 C16orf87Q6PH81 154 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF555Q8NEP9 628 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 SGF29Q96ES7 293 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 APBA2Q99767 749 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 FTHL17Q9BXU8 183 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 F8W810 466 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 TRIM66O15016 1216 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 PAEPP09466 180 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 ERVK-10P10266 1014 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 GCNT1Q02742 428 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 PHF21AQ96BD5 680 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 TADA1Q96BN2 335 aa16.76■□□□□ 0.27
PCDHA3-201ENST00000522353 E2F8A0AVK6 867 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 GLP2RO95838 553 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 UBA1P22314 1058 aaKnown RBP16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 PSMC6P62333 389 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 MKRN4PQ13434 485 aaPredicted RBP16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 C2CD6Q53TS8 623 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 FAM162AQ96A26 154 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 FICDQ9BVA6 458 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 TMEM120BA0PK00 339 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 SERPINB8P50452 374 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 ADIGQ0VDE8 80 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 CELF3Q5SZQ8 465 aaKnown RBP16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 VSIG10LQ86VR7 867 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 MROH7Q68CQ1 1323 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 PAX3P23760 479 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 PRIM2P49643 509 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 EMC1Q8N766 993 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 EDEM1Q92611 657 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 ILKAPQ9H0C8 392 aaPredicted RBP16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 TBC1D12O60347 775 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 MAP3K6O95382 1288 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF135P52742 658 aaPredicted RBP16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 LRRC8BQ6P9F7 803 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 LVRNQ6Q4G3 990 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 SPOCD1Q6ZMY3 1216 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
PCDHA3-201ENST00000522353 TRIM16O95361 564 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 ATP5BP06576 529 aaKnown RBP16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 MLNP12872 115 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 DARSP14868 501 aaKnown RBP16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 OR1E1P30953 314 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 ERMARDQ5T6L9 678 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 ZNF606Q8WXB4 792 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 GAD1Q99259 594 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 C17orf80Q9BSJ5 609 aa16.74■□□□□ 0.27
PCDHA3-201ENST00000522353 C1QTNF7Q9BXJ2 289 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms