RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 M0QYT0 321 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 KDELR1P24390 212 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 CDKN2BP42772 138 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 VSNL1P62760 191 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 ZC3H12AQ5D1E8 599 aaKnown RBP28.42■■■□□ 2.14
TRNP1-201ENST00000522111 FAM131BQ86XD5 332 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 FIBCD1Q8N539 461 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 SLC7A14Q8TBB6 771 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 ATG4AQ8WYN0 398 aa28.42■■■□□ 2.14
TRNP1-201ENST00000522111 ZSCAN5CA6NGD5 496 aaPredicted RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 GLUD2P49448 558 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 KLF1Q13351 362 aaPredicted RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 TFDP3Q5H9I0 405 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 BSPRYQ5W0U4 402 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 SLC8B1Q6J4K2 584 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 SPPL2BQ8TCT7 592 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 MAGOHBQ96A72 148 aaKnown RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 C8orf48Q96LL4 319 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 SNRNP25Q9BV90 132 aaKnown RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 SLC4A7Q9Y6M7 1214 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 PHF2O75151 1096 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 MAGEA11P43364 429 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 CDH6P55285 790 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 HTRA4P83105 476 aaPredicted RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 VPS52Q8N1B4 723 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 CCDC185Q8N715 623 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 IRGQQ8WZA9 623 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 NPY6RQ99463 290 aa28.41■■■□□ 2.14
TRNP1-201ENST00000522111 R3HDM2Q9Y2K5 976 aaKnown RBP28.41■■■□□ 2.14
TRNP1-201ENST00000522111 hCG_1818297A0A087WSY0 165 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 PGFP49763 221 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 USP46P62068 366 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 SNX1Q13596 522 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 STRADAQ7RTN6 431 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 NUP93Q8N1F7 819 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 CMASQ8NFW8 434 aaPredicted RBP28.4■■■□□ 2.14
TRNP1-201ENST00000522111 CLSTN3Q9BQT9 956 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 HTATIP2Q9BUP3 242 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 OXCT2Q9BYC2 517 aaPredicted RBP28.4■■■□□ 2.14
TRNP1-201ENST00000522111 STIM2Q9P246 746 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 INSL6Q9Y581 213 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 PCDHB12Q9Y5F1 795 aa28.4■■■□□ 2.14
TRNP1-201ENST00000522111 HEXIM1O94992 359 aaKnown RBP28.39■■■□□ 2.14
TRNP1-201ENST00000522111 DYNLT1P63172 113 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 DSG1Q02413 1049 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 CA9Q16790 459 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 TTC27Q6P3X3 843 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 HERC6Q8IVU3 1022 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 NT5C3BQ969T7 300 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 HERC2P3Q9BVR0 1158 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 AAASQ9NRG9 546 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 BACE2Q9Y5Z0 518 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 LAMA3Q16787 3333 aa28.39■■■□□ 2.14
TRNP1-201ENST00000522111 TARSL2A2RTX5 802 aaKnown RBP28.39■■■□□ 2.13
TRNP1-201ENST00000522111 TTI1O43156 1089 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 URODP06132 367 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 COPS2P61201 443 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 MMRN1Q13201 1228 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 KRT81Q14533 505 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 GLE1Q53GS7 698 aaKnown RBP28.39■■■□□ 2.13
TRNP1-201ENST00000522111 DDX53Q86TM3 631 aaKnown RBP28.39■■■□□ 2.13
TRNP1-201ENST00000522111 DPF3Q92784 378 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 MAGEB5Q9BZ81 275 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 PIGVQ9NUD9 493 aa28.39■■■□□ 2.13
TRNP1-201ENST00000522111 ESYT3A0FGR9 886 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 LCHNA4D1U4 455 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 FGF18O76093 207 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 ATP2A2P16615 1042 aaKnown RBP28.38■■■□□ 2.13
TRNP1-201ENST00000522111 CA8P35219 290 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 YWHAGP61981 247 aaKnown RBP eCLIP28.38■■■□□ 2.13
TRNP1-201ENST00000522111 DEUP1Q05D60 604 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 BOLA3Q53S33 107 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 HERVK_113Q902F9 699 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 HAUS1Q96CS2 278 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 LBHD1Q9BQE6 289 aaPredicted RBP28.38■■■□□ 2.13
TRNP1-201ENST00000522111 SLITRK6Q9H5Y7 841 aa28.38■■■□□ 2.13
TRNP1-201ENST00000522111 TLL1O43897 1013 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 HAPLN1P10915 354 aaPredicted RBP28.37■■■□□ 2.13
TRNP1-201ENST00000522111 RDXP35241 583 aaKnown RBP28.37■■■□□ 2.13
TRNP1-201ENST00000522111 PPM1AP35813 382 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 KCNJ1P48048 391 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 GUCY2DQ02846 1103 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 PPP6R3Q5H9R7 873 aaPredicted RBP28.37■■■□□ 2.13
TRNP1-201ENST00000522111 CCDC137Q6PK04 289 aaKnown RBP28.37■■■□□ 2.13
TRNP1-201ENST00000522111 MAIP1Q8WWC4 291 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 NCAPGQ9BPX3 1015 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 FAM204AQ9H8W3 233 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 TMPRSS4Q9NRS4 437 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 DDIT4Q9NX09 232 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 TJP3O95049 919 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 CSPG5O95196 566 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 LINC00271P0C7V0 271 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 H2AFXP16104 143 aaPredicted RBP28.37■■■□□ 2.13
TRNP1-201ENST00000522111 SMARCB1Q12824 385 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 MTMR3Q13615 1198 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 ERMARDQ5T6L9 678 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 DENND5BQ6ZUT9 1274 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 SCML4Q8N228 414 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 GIPC2Q8TF65 315 aa28.37■■■□□ 2.13
TRNP1-201ENST00000522111 DHX35Q9H5Z1 703 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms