RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CLASP2O75122 1294 aaKnown RBP22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 TFE3P19532 575 aaPredicted RBP22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 CTNNA2P26232 953 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 CXCR5P32302 372 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 PGFP49763 221 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 TAS2R40P59535 323 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 PLD1Q13393 1074 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 SLC25A52Q3SY17 297 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 ARFGAP1Q8N6T3 406 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 FAM172AQ8WUF8 416 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 KRT35Q92764 455 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 TBCBQ99426 244 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 NMUR1Q9HB89 426 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 ABCC13Q9NSE7 274 aa22.34■■□□□ 1.17
R3HCC1-208ENST00000522012 FAM92AA1XBS5 289 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 CCDC66A2RUB6 948 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 KCNK3O14649 394 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 PER2O15055 1255 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 SRGAP2O75044 1071 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 LRCH4O75427 683 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 LRG1P02750 347 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 C8AP07357 584 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 TCF4P15884 667 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 CTNNA1P35221 906 aaKnown RBP22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 GJC1P36383 396 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 RAB6CQ53S08 254 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 RBM23Q86U06 439 aaKnown RBP22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 RHOT1Q8IXI2 618 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 SLITRK1Q96PX8 696 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 OSBPL9Q96SU4 736 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 TTLL2Q9BWV7 592 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 RAB6CQ9H0N0 254 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 PCDHA3Q9Y5H8 950 aa22.33■■□□□ 1.17
R3HCC1-208ENST00000522012 SZT2Q5T011 3432 aa22.33■■□□□ 1.16
R3HCC1-208ENST00000522012 RFXAPO00287 272 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 TCP1P17987 556 aaKnown RBP22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 MARCKSL1P49006 195 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 AMPD2Q01433 879 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 HADHQ16836 314 aaKnown RBP22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 SCYL2Q6P3W7 929 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 DNAJB7Q7Z6W7 309 aaPredicted RBP22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 NPY6RQ99463 290 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 TLR8Q9NR97 1041 aaKnown RBP22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 PCSK1NQ9UHG2 260 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 PTPRDP23468 1912 aa22.32■■□□□ 1.16
R3HCC1-208ENST00000522012 SYNJ2BP-COX16A0A087WUM0 186 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 M0QYT0 321 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PRLRP16471 622 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 HMGA1P17096 107 aaKnown RBP22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 MIPP30301 263 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PCK1P35558 622 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PITX1P78337 314 aaPredicted RBP22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 BEND5Q7L4P6 421 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ADGRD2Q7Z7M1 963 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ITIH5Q86UX2 942 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ADAM32Q8TC27 787 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 RNF139Q8WU17 664 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 CENPIQ92674 756 aaPredicted RBP22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 NCAPGQ9BPX3 1015 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ZWILCHQ9H900 591 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 OSER1Q9NX31 292 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 RRN3Q9NYV6 651 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 COX16Q9P0S2 106 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 GBF1Q92538 1859 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PSTPIP1O43586 416 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 EPCAMP16422 314 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PEX5P50542 639 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 NME3Q13232 169 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PPM1LQ5SGD2 360 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ZFYVE27Q5T4F4 411 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 RSRC2Q7L4I2 434 aaKnown RBP22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 STRADAQ7RTN6 431 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 COG1Q8WTW3 980 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ALG3Q92685 438 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 NT5C3BQ969T7 300 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 PSMG2Q969U7 264 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF512Q96ME7 567 aaPredicted RBP22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ADAM33Q9BZ11 813 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 TLE6Q9H808 572 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 MAN1C1Q9NR34 630 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 USP18Q9UMW8 372 aa22.31■■□□□ 1.16
R3HCC1-208ENST00000522012 ZNF185O15231 689 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 PRPSAP2O60256 369 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 PSEN1P49768 467 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 ATXN1P54253 815 aaKnown RBP22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 HDAC4P56524 1084 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 RWDD2BP57060 319 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 DEUP1Q05D60 604 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 LRRC38Q5VT99 294 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 ELMOD1Q8N336 334 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 PDZD8Q8NEN9 1154 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 SLC22A17Q8WUG5 538 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 MYRFLQ96LU7 910 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 PLEKHA4Q9H4M7 779 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 FAM204AQ9H8W3 233 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 CALCOCO1Q9P1Z2 691 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 NUDT5Q9UKK9 219 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 ASB3Q9Y575 518 aa22.3■■□□□ 1.16
R3HCC1-208ENST00000522012 MYH10P35580 1976 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms