RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ELMO2Q96JJ3 720 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 THTPAQ9BU02 230 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 FTHL17Q9BXU8 183 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 DMAP1Q9NPF5 467 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 CRLS1Q9UJA2 301 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 TMEM150BA6NC51 233 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 PLEKP08567 350 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 MAGEA4P43358 317 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 DAB2P98082 770 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 MRPL28Q13084 256 aaKnown RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 CLEC16AQ2KHT3 1053 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 SYCP2LQ5T4T6 812 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 CHORDC1Q9UHD1 332 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 AP4E1Q9UPM8 1137 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 ATRNO75882 1429 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 XYLBO75191 536 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 ZNF268Q14587 947 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 LONRF1Q17RB8 773 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 PAPD7Q5XG87 772 aaKnown RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 ZNF606Q8WXB4 792 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 COPS5Q92905 334 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 VCPIP1Q96JH7 1222 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 PABPC3Q9H361 631 aaKnown RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 TMBIM4Q9HC24 238 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 KIF17Q9P2E2 1029 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 TSPAN16Q9UKR8 245 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 TNFSF13BQ9Y275 285 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 C2orf81A6NN90 581 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 RTN3O95197 1032 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 CCR1P32246 355 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 KCNJ1P48048 391 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 SARSP49591 514 aaKnown RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 NUP107P57740 925 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 ZNF669Q96BR6 464 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 MRPL1Q9BYD6 325 aaKnown RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 UXTQ9UBK9 157 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 NCAM2O15394 837 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 PMPCBO75439 489 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 RHOCP08134 193 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 SNRPAP09012 282 aaKnown RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 UBTFL6P0CB48 400 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 GEMIN4P57678 1058 aaKnown RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 LRP10Q7Z4F1 713 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 FAM131BQ86XD5 332 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 TMEM199Q8N511 208 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 SLC35C1Q96A29 364 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 TBCBQ99426 244 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 NAT9Q9BTE0 207 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 CASS4Q9NQ75 786 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 RAB21Q9UL25 225 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 RECQL4O94761 1208 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 PGK1P00558 417 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 SMIM10L2AP0DMW4 78 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 SMIM10L2BP0DMW5 78 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 TTLL9Q3SXZ7 439 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 WLSQ5T9L3 541 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 C3orf62Q6ZUJ4 267 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
USP42-207ENST00000521713 CNTNAP2Q9UHC6 1331 aa16.71■□□□□ 0.27
USP42-207ENST00000521713 NFAT5O94916 1531 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 CCDC78A2IDD5 438 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 MYL4P12829 197 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 ARL4DP49703 201 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.26
USP42-207ENST00000521713 CAPRIN1Q14444 709 aaKnown RBP16.71■□□□□ 0.26
USP42-207ENST00000521713 RFX8Q6ZV50 586 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 ANKS3Q6ZW76 656 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 SLC47A2Q86VL8 602 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 TATDN2Q93075 761 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 BHMTQ93088 406 aa16.71■□□□□ 0.26
USP42-207ENST00000521713 ITGA8P53708 1063 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 ZRANB3Q5FWF4 1079 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 AARS2Q5JTZ9 985 aaKnown RBP16.7■□□□□ 0.26
USP42-207ENST00000521713 ZBTB41Q5SVQ8 909 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
USP42-207ENST00000521713 EXD1Q8NHP7 514 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 USP18Q9UMW8 372 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 CDY2AQ9Y6F7 541 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 HNRNPCL2B2RXH8 293 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 MRNIPQ6NTE8 343 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 PLD3Q8IV08 490 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 LRRC34Q8IZ02 419 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 OR2W6PQ8NHA6 318 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 GAD1Q99259 594 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 VPS28Q9UK41 221 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 UROC1Q96N76 676 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 YWHAQP27348 245 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 TRIM16LQ309B1 348 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 PRAMEF19Q5SWL8 479 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 CARNMT1Q8N4J0 409 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 FAM118BQ9BPY3 351 aa16.7■□□□□ 0.26
USP42-207ENST00000521713 CELF4Q9BZC1 486 aaKnown RBP16.7■□□□□ 0.26
USP42-207ENST00000521713 YWHAZP63104 245 aaKnown RBP16.69■□□□□ 0.26
USP42-207ENST00000521713 RETSATQ6NUM9 610 aa16.69■□□□□ 0.26
USP42-207ENST00000521713 HORMAD1Q86X24 394 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms