RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CD52P31358 61 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 CDH5P33151 784 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 CRHR2Q13324 411 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 SPDYCQ5MJ68 293 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 CST9Q5W186 159 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 DENND5BQ6ZUT9 1274 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 LRRC52Q8N7C0 313 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 FNIP1Q8TF40 1166 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 PAFAH2Q99487 392 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 TXLNGYQ9BZA5 131 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 PCDH18Q9HCL0 1135 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 TMPRSS4Q9NRS4 437 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 PAK5Q9P286 719 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 PSMC3IPQ9P2W1 217 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 KCNK1O00180 336 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 GPR32O75388 356 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 USP17L7P0C7H9 530 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 YWHAZP63104 245 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 SARNPP82979 210 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 PDK2Q15119 407 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 ATXN7L3BQ96GX2 97 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 CYTH2Q99418 400 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 FOXP3Q9BZS1 431 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 BAIAP2L1Q9UHR4 511 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 KBTBD13C9JR72 458 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 GEMIN4P57678 1058 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 CDKL3Q8IVW4 592 aaPredicted RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 SLC35B2Q8TB61 432 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 ULBP1Q9BZM6 244 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 ARHGAP39Q9C0H5 1083 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 LOXHD1Q8IVV2 1947 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 PCK1P35558 622 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 ACADSBP45954 432 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 AFF1P51825 1210 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 CRADDP78560 199 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 KLHL38Q2WGJ6 581 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 RNASEH2BQ5TBB1 312 aaKnown RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 LGSNQ5TDP6 509 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 TAF2Q6P1X5 1199 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 LVRNQ6Q4G3 990 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 KDELC2Q7Z4H8 507 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 PLD5Q8N7P1 536 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 USP33Q8TEY7 942 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 PRCCQ92733 491 aaPredicted RBP11.8□□□□□ -0.52
CLK4-206ENST00000520878 KCNK16Q96T55 309 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 LGMNQ99538 433 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 APBA2Q99767 749 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
CLK4-206ENST00000520878 ALDH3A1P30838 453 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 BRCC3P46736 316 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 CLCNKBP51801 687 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 PTK7Q13308 1070 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 RHBDF2Q6PJF5 856 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 CCDC91Q7Z6B0 441 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 CCDC185Q8N715 623 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 NIPA2Q8N8Q9 360 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 CMASQ8NFW8 434 aaPredicted RBP11.79□□□□□ -0.52
CLK4-206ENST00000520878 PCDH19Q8TAB3 1148 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
CLK4-206ENST00000520878 ADAM7Q9H2U9 754 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 ETNK1Q9HBU6 452 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 EEF2KO00418 725 aaKnown RBP11.79□□□□□ -0.52
CLK4-206ENST00000520878 TMEM63AO94886 807 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 DRD4P21917 467 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 AXLP30530 894 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 FCGRTP55899 365 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 MRPS6P82932 125 aaKnown RBP11.79□□□□□ -0.52
CLK4-206ENST00000520878 PDE1BQ01064 536 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 ACAP1Q15027 740 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 FAM228AQ86W67 206 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 ARRDC4Q8NCT1 418 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 ADAM2Q99965 735 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 SLC45A1Q9Y2W3 748 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
CLK4-206ENST00000520878 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
CLK4-206ENST00000520878 IQANK1A0A1B0GTG1 560 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 LPXNO60711 386 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 ZNF865P0CJ78 1059 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 SETSIPP0DME0 302 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 BDNFP23560 247 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 IGFBP6P24592 240 aaPredicted RBP11.78□□□□□ -0.52
CLK4-206ENST00000520878 TPI1P60174 286 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
CLK4-206ENST00000520878 BMPR2Q13873 1038 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms