RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 FAM183BPQ6ZVS7 135 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 CMTM8Q8IZV2 173 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 KIAA1958Q8N8K9 716 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 CLEC4CQ8WTT0 213 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 NDRG1Q92597 394 aaKnown RBP18.25■□□□□ 0.51
TRAM1-203ENST00000520700 ANP32BQ92688 251 aaKnown RBP18.25■□□□□ 0.51
TRAM1-203ENST00000520700 GOLGA1Q92805 767 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 SMARCD2Q92925 531 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 NXPE3Q969Y0 559 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 E2F7Q96AV8 911 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 ZSWIM3Q96MP5 696 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 ASB16Q96NS5 453 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRAM1-203ENST00000520700 OLA1Q9NTK5 396 aaKnown RBP18.25■□□□□ 0.51
TRAM1-203ENST00000520700 OBP2AQ9NY56 170 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 TAS2R14Q9NYV8 317 aa18.25■□□□□ 0.51
TRAM1-203ENST00000520700 XIRP2A4UGR9 3374 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TRAV19A0A0A6YYK7 116 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TCRBV5S1A1TA0A578 114 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 C2orf78A6NCI8 922 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 C19orf67A6NJJ6 358 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 ANHXE9PGG2 379 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 PIK3R2O00459 728 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TLR5O60602 858 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 HSF2BPO75031 334 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 LCA5LO95447 670 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 MYBL1P10243 752 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 GBP2P32456 591 aaPredicted RBP18.24■□□□□ 0.51
TRAM1-203ENST00000520700 ATP5C1P36542 298 aaKnown RBP18.24■□□□□ 0.51
TRAM1-203ENST00000520700 STXBP5Q5T5C0 1151 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 MSANTD2Q6P1R3 559 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 MAB21L3Q8N8X9 362 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TDRD5Q8NAT2 981 aaKnown RBP18.24■□□□□ 0.51
TRAM1-203ENST00000520700 ING5Q8WYH8 240 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 PDLIM2Q96JY6 352 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 SLC2A13Q96QE2 648 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 C11orf70Q9BRQ4 267 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 RNF38Q9H0F5 515 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 POPDC2Q9HBU9 364 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 TMEM51Q9NW97 253 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 ARHGAP26Q9UNA1 814 aa18.24■□□□□ 0.51
TRAM1-203ENST00000520700 SPTBN5Q9NRC6 3674 aaKnown RBP18.23■□□□□ 0.51
TRAM1-203ENST00000520700 DOCK8Q8NF50 2099 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 C2CD4DB7Z1M9 353 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 COCHO43405 550 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 AKR1B10O60218 316 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ABL1P00519 1130 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 AVPR1AP37288 418 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ZP2Q05996 745 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 FAM78AQ5JUQ0 283 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 C10orf76Q5T2E6 689 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 HFE2Q6ZVN8 426 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 MTSS1LQ765P7 747 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ARID3BQ8IVW6 561 aaPredicted RBP18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ARL14EPQ8N8R7 260 aaPredicted RBP18.23■□□□□ 0.51
TRAM1-203ENST00000520700 C3orf20Q8ND61 904 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ZSCAN18Q8TBC5 510 aaPredicted RBP18.23■□□□□ 0.51
TRAM1-203ENST00000520700 SLC22A12Q96S37 553 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 DEF6Q9H4E7 631 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 CCSER2Q9H7U1 834 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 KIF9Q9HAQ2 790 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 TDP1Q9NUW8 608 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 RRN3Q9NYV6 651 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 TMEM59LQ9UK28 342 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
TRAM1-203ENST00000520700 SIGLEC16A6NMB1 481 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 CCDC122Q5T0U0 273 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 PLEKHA7Q6IQ23 1121 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 TMEM139Q8IV31 216 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 NT5C3BQ969T7 300 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 FAM149B1Q96BN6 582 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 PIWIL1Q96J94 861 aaKnown RBP18.22■□□□□ 0.51
TRAM1-203ENST00000520700 CYP2S1Q96SQ9 504 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 BAG1Q99933 345 aaPredicted RBP18.22■□□□□ 0.51
TRAM1-203ENST00000520700 SLITRK6Q9H5Y7 841 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 DNMT3LQ9UJW3 386 aa18.22■□□□□ 0.51
TRAM1-203ENST00000520700 OBSL1O75147 1896 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 ANKRD62A6NC57 917 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 EIF3CLB5ME19 914 aaKnown RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 ECI2O75521 394 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 DAB1O75553 588 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 FCARP24071 287 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 NOS2P35228 1153 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 MATKP42679 507 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 GFPT1Q06210 699 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 TAF5Q15542 800 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 C2CD6Q53TS8 623 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 PPP1R15BQ5SWA1 713 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 DDX42Q86XP3 938 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 CELF5Q8N6W0 485 aaKnown RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 RNF139Q8WU17 664 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 USP13Q92995 863 aaPredicted RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 ELSPBP1Q96BH3 223 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 RPGRIP1Q96KN7 1286 aa18.21■□□□□ 0.51
TRAM1-203ENST00000520700 EIF3CQ99613 913 aaKnown RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 DDX23Q9BUQ8 820 aaKnown RBP18.21■□□□□ 0.51
TRAM1-203ENST00000520700 KLF16Q9BXK1 252 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms