RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 DRC1Q96MC2 740 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TSPAN18Q96SJ8 248 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 FIZ1Q96SL8 496 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ACBD6Q9BR61 282 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 RPF1Q9H9Y2 349 aaKnown RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 C17orf75Q9HAS0 396 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 SMPD4Q9NXE4 827 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 DPP3Q9NY33 737 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 LRWD1Q9UFC0 647 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 PCDHGB2Q9Y5G2 931 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 ICE1Q9Y2F5 2266 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 A0A1B0GVT2 93 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 SYCE3A1L190 88 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 GABRDO14764 452 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 FLRT2O43155 660 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TNFSF14O43557 240 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 XPOTO43592 962 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 GREM1O60565 184 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 ZNF217O75362 1048 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 LETM1O95202 739 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 HLA-EP13747 358 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 PAX3P23760 479 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 UBA7P41226 1012 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 MATKP42679 507 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 ACOT2P49753 483 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 CACNA2D1P54289 1103 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 RPL10AP62906 217 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 SEMG2Q02383 582 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 STRN3Q13033 797 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 LY6DQ14210 128 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 RTP5Q14D33 572 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 NFE2Q16621 373 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TMEM119Q4V9L6 283 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 HYIQ5T013 277 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 DCAF12L1Q5VU92 463 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 METTL23Q86XA0 190 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TMEM25Q86YD3 366 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 PDILTQ8N807 584 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 SNIP1Q8TAD8 396 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 DHX58Q96C10 678 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TOE1Q96GM8 510 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 CDC6Q99741 560 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 FUCA2Q9BTY2 467 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TTLL2Q9BWV7 592 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 GPR174Q9BXC1 333 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TNMDQ9H2S6 317 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 CRTAC1Q9NQ79 661 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 DDX43Q9NXZ2 648 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 USP36Q9P275 1121 aaKnown RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 CFAP97Q9P2B7 532 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 DERAQ9Y315 318 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 NFE2L3Q9Y4A8 694 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-209ENST00000520630 SNX11Q9Y5W9 270 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 STK24Q9Y6E0 443 aa8.51□□□□□ -1.05
CSMD1-209ENST00000520630 TBC1D3BA6NDS4 549 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 METTL12A8MUP2 240 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 B8ZZF3 427 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 BCAT2O15382 392 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 HOXC11O43248 304 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SLC26A4O43511 780 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SLFN14P0C7P3 912 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 NCAM1P13591 858 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 GNSP15586 552 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 PFKLP17858 780 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 PLCG1P19174 1290 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 LMO2P25791 158 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 MAGEA11P43364 429 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 CSNK1EP49674 416 aaKnown RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SLC12A3P55017 1021 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 KCNC4Q03721 635 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 MAPK8IP2Q13387 824 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 KIF19Q2TAC6 998 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 C10orf76Q5T2E6 689 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 LAYNQ6UX15 382 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 LIMS2Q7Z4I7 341 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 TMPRSS12Q86WS5 348 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 ERICH1Q86X53 443 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 GAS2L3Q86XJ1 694 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SCN4BQ8IWT1 228 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 BBS7Q8IWZ6 715 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SPACA3Q8IXA5 215 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SNX29Q8TEQ0 813 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 TTC9Q92623 222 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 SPATA17Q96L03 361 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 ORAI3Q9BRQ5 295 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 RAB34Q9BZG1 259 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 ITM2CQ9NQX7 267 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 BLOC1S4Q9NUP1 217 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 CCDC39Q9UFE4 941 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 USP25Q9UHP3 1055 aa8.5□□□□□ -1.05
CSMD1-209ENST00000520630 EIF2B4Q9UI10 523 aaKnown RBP8.5□□□□□ -1.05
CSMD1-209ENST00000520630 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms