RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SH3BP4Q9P0V3 963 aa4.76□□□□□ -1.65
SQLE-204ENST00000520493 SERTAD3Q9UJW9 196 aa4.76□□□□□ -1.65
SQLE-204ENST00000520493 PRRT4C9JH25 899 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 SYT5O00445 386 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 DCLK1O15075 740 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 HSP90AA1P07900 732 aaKnown RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 PDHA1P08559 390 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 IL1R1P14778 569 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 PDIA3P30101 505 aaKnown RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 LRPAP1P30533 357 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 CYP2C18P33260 490 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 DDIT3P35638 169 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 CLCN2P51788 898 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 COPAP53621 1224 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 ARL4CP56559 192 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 EEFSECP57772 596 aaKnown RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 LMOD3Q0VAK6 560 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 FOXD4Q12950 439 aaPredicted RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 GPR162Q16538 588 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 PFKFB4Q16877 469 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 TREML2Q5T2D2 321 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 RGS7BPQ6MZT1 257 aaPredicted RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 MMS22LQ6ZRQ5 1243 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 RFX8Q6ZV50 586 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 GAS2L3Q86XJ1 694 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 MYCT1Q8N699 235 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 EID2BQ96D98 161 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 SNX27Q96L92 541 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 PAGR1Q9BTK6 254 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 MAGEB5Q9BZ81 275 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 ZSCAN32Q9NX65 697 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 MAP3K20Q9NYL2 800 aaKnown RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 FLRT1Q9NZU1 646 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 XPR1Q9UBH6 696 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 ZNF212Q9UDV6 495 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 CCNL1Q9UK58 526 aaPredicted RBP4.75□□□□□ -1.65
SQLE-204ENST00000520493 SLC39A10Q9ULF5 831 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 MAN2B2Q9Y2E5 1009 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 SCINQ9Y6U3 715 aa4.75□□□□□ -1.65
SQLE-204ENST00000520493 AOX1Q06278 1338 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 DNAJC9-AS1A6NH13 148 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 NPC1O15118 1278 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 A1BGP04217 495 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 IL6RP08887 468 aaPredicted RBP4.74□□□□□ -1.65
SQLE-204ENST00000520493 DHRS4L1P0CG22 281 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 BTF3P20290 206 aaKnown RBP4.74□□□□□ -1.65
SQLE-204ENST00000520493 SERPINF1P36955 418 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 UCP3P55916 312 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 TPTEP56180 551 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 KRT17Q04695 432 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 INSCQ1MX18 579 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 MGAT5BQ3V5L5 792 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 TMEM119Q4V9L6 283 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 PCID2Q5JVF3 399 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 DCAF12L1Q5VU92 463 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 MAVSQ7Z434 540 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 CCDC150Q8NCX0 1101 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 OR56A3Q8NH54 315 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 SMCR8Q8TEV9 937 aaPredicted RBP4.74□□□□□ -1.65
SQLE-204ENST00000520493 UBE2Q2Q8WVN8 375 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 ATG4AQ8WYN0 398 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 SEMA4CQ9C0C4 833 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 C9orf78Q9NZ63 289 aaPredicted RBP4.74□□□□□ -1.65
SQLE-204ENST00000520493 CA14Q9ULX7 337 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 GPR52Q9Y2T5 361 aa4.74□□□□□ -1.65
SQLE-204ENST00000520493 LOC102723971A0A1B0GUV8 181 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 H0YIZ8 118 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 IKBKBO14920 756 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 FESP07332 822 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 CELA2AP08217 269 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 ITGA5P08648 1049 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 DLDP09622 509 aaKnown RBP4.73□□□□□ -1.65
SQLE-204ENST00000520493 NPSP0C0P6 89 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 CERS1P27544 350 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 GABRB3P28472 473 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 PCSK6P29122 969 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 CASP2P42575 452 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 PDE6CP51160 858 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 GALNT1Q10472 559 aaPredicted RBP4.73□□□□□ -1.65
SQLE-204ENST00000520493 SPARCL1Q14515 664 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 SLC29A2Q14542 456 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 RAB30Q15771 203 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
SQLE-204ENST00000520493 TBC1D25Q3MII6 688 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 TANGO2Q6ICL3 276 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 RP9Q8TA86 221 aaKnown RBP4.73□□□□□ -1.65
SQLE-204ENST00000520493 FAM71BQ8TC56 605 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 DDB2Q92466 427 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 DPF1Q92782 380 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 MUL1Q969V5 352 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 TBC1D20Q96BZ9 403 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 PPP1R9BQ96SB3 815 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 MESP1Q9BRJ9 268 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 ZHX3Q9H4I2 956 aa4.73□□□□□ -1.65
SQLE-204ENST00000520493 AS3MTQ9HBK9 375 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms