RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 NME7Q9Y5B8 376 aa8.35□□□□□ -1.07
CTHRC1-203ENST00000520337 CILPO75339 1184 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 THP07101 528 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 GZMAP12544 262 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 P4HA1P13674 534 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 CAPN2P17655 700 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 CD58P19256 250 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 NME2P22392 152 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 GSTT1P30711 240 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 PDE6CP51160 858 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 SCNN1GP51170 649 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 CCL23P55773 120 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 LILRA4P59901 499 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 DMTNQ08495 405 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 INCA1Q0VD86 236 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 KIF5AQ12840 1032 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 MYO1EQ12965 1108 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 CLLU1OSQ5K130 101 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 CD300LGQ6UXG3 332 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 NECAB2Q7Z6G3 386 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF677Q86XU0 584 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC4A11Q8NBS3 891 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 RNF169Q8NCN4 708 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF606Q8WXB4 792 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 SEPT8Q92599 483 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 SCLYQ96I15 445 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 TWNKQ96RR1 684 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 ELOVL4Q9GZR5 314 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 ISCUQ9H1K1 167 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 UBN1Q9NPG3 1134 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 HMGXB4Q9UGU5 601 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 INTUQ9ULD6 942 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 GUCA1BQ9UMX6 200 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 ATP11BQ9Y2G3 1177 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 PTPRDP23468 1912 aa8.34□□□□□ -1.07
CTHRC1-203ENST00000520337 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TRIM43BA6NCK2 446 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 BTNL10A8MVZ5 291 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TMCO5BA8MYB1 307 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 KPNA7A9QM74 516 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 GIPC1O14908 333 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 KIAA0355O15063 1070 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 KRT86O43790 486 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 B4GALT3O60512 393 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 CLSTN1O94985 981 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PARNO95453 639 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 POMCP01189 267 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 FTLP02792 175 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 CYP1A1P04798 512 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PAEPP09466 180 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 CLTBP09497 229 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 H2AFZP0C0S5 128 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 UNGP13051 313 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ITGB8P26012 769 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ARNTP27540 789 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 GNA15P30679 374 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 RPL9P32969 192 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PNPLA4P41247 253 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TAF6P49848 677 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 CLCNKBP51801 687 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 GALCP54803 685 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 GNG11P61952 73 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TNNC1P63316 161 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 UPP1Q16831 310 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 CLEC16AQ2KHT3 1053 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ARHGAP29Q52LW3 1261 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ACAD10Q6JQN1 1059 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 SYT10Q6XYQ8 523 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 H2AFVQ71UI9 128 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 NLRC5Q86WI3 1866 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ABI1Q8IZP0 508 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 APBB2Q92870 758 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TRIM43Q96BQ3 446 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 RPS6KC1Q96S38 1066 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 MMS19Q96T76 1030 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 MRPL45Q9BRJ2 306 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PAAF1Q9BRP4 392 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TSGA10Q9BZW7 698 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ELAC1Q9H777 363 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 TMEM161AQ9NX61 479 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 OGFRQ9NZT2 677 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 ZC3H7BQ9UGR2 993 aaKnown RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PRDM4Q9UKN5 801 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 PPM1HQ9ULR3 514 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 BARX2Q9UMQ3 279 aaPredicted RBP8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 SNX9Q9Y5X1 595 aa8.33□□□□□ -1.08
CTHRC1-203ENST00000520337 MACROD2A1Z1Q3 448 aa8.32□□□□□ -1.08
CTHRC1-203ENST00000520337 ANKRD62A6NC57 917 aa8.32□□□□□ -1.08
CTHRC1-203ENST00000520337 PODXLO00592 558 aa8.32□□□□□ -1.08
CTHRC1-203ENST00000520337 THAP12O43422 761 aa8.32□□□□□ -1.08
CTHRC1-203ENST00000520337 KIF5CO60282 957 aa8.32□□□□□ -1.08
CTHRC1-203ENST00000520337 RTN2O75298 545 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms