RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 MYO18AQ92614 2054 aaKnown RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 A0A1W2PQF6 199 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 MAPK13O15264 365 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 CACNG3O60359 315 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 P4HA1P13674 534 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 CEACAM1P13688 526 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 GABRG2P18507 467 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 HOXD12P35452 270 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 MAP3K7CLP57077 242 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 ZNF252P-AS1Q0IIN9 211 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 FOXD4L6Q3SYB3 417 aaPredicted RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 SPOPLQ6IQ16 392 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 FOXD4L3Q6VB84 417 aaPredicted RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 LPCAT2Q7L5N7 544 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 TTC30AQ86WT1 665 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 SYT12Q8IV01 421 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 TMEFF1Q8IYR6 380 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 ZNF513Q8N8E2 541 aaPredicted RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 NAT16Q8N8M0 369 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 PIGKQ92643 395 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 HNRNPABQ99729 332 aaKnown RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 FBXO44Q9H4M3 255 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 PNPLA8Q9NP80 782 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 TLR8Q9NR97 1041 aaKnown RBP12.46□□□□□ -0.41
POLB-208ENST00000520008 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 DEC1Q9P2X7 70 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 PILRBQ9UKJ0 227 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 HPSEQ9Y251 543 aa12.46□□□□□ -0.41
POLB-208ENST00000520008 MYH10P35580 1976 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 TBC1D3BA6NDS4 549 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 TBX18O95935 607 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 MYL1P05976 194 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 IRF1P10914 325 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 PFKFB1P16118 471 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
POLB-208ENST00000520008 LMAN2Q12907 356 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 NFIL3Q16649 462 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 PREPLQ4J6C6 727 aaPredicted RBP12.45□□□□□ -0.42
POLB-208ENST00000520008 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 BTBD8Q5XKL5 378 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 KLHDC10Q6PID8 442 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 ARMCX6Q7L4S7 300 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 P2RY11Q96G91 374 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 GABRG3Q99928 467 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 APOBEC3GQ9HC16 384 aaKnown RBP12.45□□□□□ -0.42
POLB-208ENST00000520008 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
POLB-208ENST00000520008 CFAP45Q9UL16 551 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 SCML2Q9UQR0 700 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 SPEGQ15772 3267 aa12.45□□□□□ -0.42
POLB-208ENST00000520008 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
POLB-208ENST00000520008 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
POLB-208ENST00000520008 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 CYP26A1O43174 497 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 HLA-DRAP01903 254 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 PROS1P07225 676 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 FAM200BP0CF97 657 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 HOXB2P14652 356 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 ENGP17813 658 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 ITPKAP23677 461 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 NTSR1P30989 418 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 DPP6P42658 865 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 ENPEPQ07075 957 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
POLB-208ENST00000520008 ANO4Q32M45 955 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 EGFLAMQ63HQ2 1017 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 Q6ZNB5 142 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 ZNF276Q8N554 614 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 ACOX2Q99424 681 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
POLB-208ENST00000520008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
POLB-208ENST00000520008 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
POLB-208ENST00000520008 PI4KAP42356 2102 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 IGF2RP11717 2491 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 IGHV1OR15-9A0A0B4J2B8 117 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 C1QTNF9BB2RNN3 333 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 PRRT4C9JH25 899 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 NEDD8-MDP1E9PL57 170 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 MAP3K13O43283 966 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 AP5Z1O43299 807 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 CILPO75339 1184 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 RHOBTB3O94955 611 aa12.43□□□□□ -0.42
POLB-208ENST00000520008 CLSTN1O94985 981 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms