RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 IFI35P80217 286 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 PIGHQ14442 188 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 MXD4Q14582 209 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 STAT4Q14765 748 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 PPP1R7Q15435 360 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 FAM187BQ17R55 369 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ODF2Q5BJF6 829 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ZC3H12AQ5D1E8 599 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 VSTM1Q6UX27 236 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 METTL7BQ6UX53 244 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 RGS9BPQ6ZS82 235 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 CCDC121Q6ZUS5 278 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ADAT2Q7Z6V5 191 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 ZCCHC9Q8N567 271 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 ALLCQ8N6M5 410 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ANKS4BQ8N8V4 417 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 CCDC197Q8NCU1 140 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 OR5B17Q8NGF7 314 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 C1orf54Q8WWF1 131 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 CKAP2Q8WWK9 683 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 TCP11Q8WWU5 503 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ZNF606Q8WXB4 792 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 SEPT1Q8WYJ6 367 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 EZH1Q92800 747 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 ZKSCAN4Q969J2 545 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 ASIC4Q96FT7 647 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 BICD1Q96G01 975 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 TTC25Q96NG3 672 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 SLITRK1Q96PX8 696 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 ACO2Q99798 780 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 PI4K2AQ9BTU6 479 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 MSTO1Q9BUK6 570 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 TARS2Q9BW92 718 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 MRPL4Q9BYD3 311 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 OSBPL8Q9BZF1 889 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 TRIM7Q9C029 511 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 NIF3L1Q9GZT8 377 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 NSRP1Q9H0G5 558 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 C2orf40Q9H1Z8 148 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 FZD8Q9H461 694 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 UBN1Q9NPG3 1134 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 PPANQ9NQ55 473 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 FAM105AQ9NUU6 356 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 INTS9Q9NV88 658 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 DDX56Q9NY93 547 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 NINJ2Q9NZG7 142 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 CHORDC1Q9UHD1 332 aaPredicted RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 CPSF3Q9UKF6 684 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 SLC12A4Q9UP95 1085 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 R3HDM2Q9Y2K5 976 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 NUB1Q9Y5A7 615 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 PCDHB4Q9Y5E5 795 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 SNCAIPQ9Y6H5 919 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 CITO14578 2027 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 EVPLQ92817 2033 aa5.31□□□□□ -1.56
SDC2-204ENST00000519914 PDCD11Q14690 1871 aaKnown RBP5.31□□□□□ -1.56
SDC2-204ENST00000519914 ARID1BQ8NFD5 2236 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 DNAJC25-GNG10A0A024R161 153 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 hCG_1818297A0A087WSY0 165 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 A0A0G2JLL6 359 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 GOLGA6L7A0A1B0GV03 622 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ANKRD33BA6NCL7 494 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TMEM88BA6NKF7 163 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 C3orf70A6NLC5 250 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 E7ESA3 106 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 O00370 1275 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ACKR2O00590 384 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ALOX15BO15296 676 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TLR3O15455 904 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 PRPF4O43172 522 aaKnown RBP eCLIP5.3□□□□□ -1.56
SDC2-204ENST00000519914 SNX3O60493 162 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CDH16O75309 829 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 USP2O75604 605 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 CNMDO75829 334 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 FAM155BO75949 473 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 TJP3O95049 919 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SLC25A27O95847 323 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CYP11A1P05108 521 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ITGAVP06756 1048 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 HOXC6P09630 235 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 HNRNPH1P31943 449 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 GABRB2P47870 512 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ACOT2P49753 483 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 LIG3P49916 1009 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 STAT5BP51692 787 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 VCPP55072 806 aaKnown RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 ZNF252P-AS1Q0IIN9 211 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 CCDC15Q0P6D6 951 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 IFT88Q13099 833 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ACVR2BQ13705 512 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MAP7Q14244 749 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 MORF4L2Q15014 288 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 ACAP1Q15027 740 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 PDCD2Q16342 344 aaPredicted RBP5.3□□□□□ -1.56
SDC2-204ENST00000519914 KYAT1Q16773 422 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 SGSM1Q2NKQ1 1148 aa5.3□□□□□ -1.56
SDC2-204ENST00000519914 GALNTL6Q49A17 601 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms