RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 MAN1A1P33908 653 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 USP46P62068 366 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 TAF5Q15542 800 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 HADHQ16836 314 aaKnown RBP18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 SND1Q7KZF4 910 aaKnown RBP eCLIP18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 JOSD2Q8TAC2 188 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 BTBD6Q96KE9 485 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 DDX23Q9BUQ8 820 aaKnown RBP18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 CLIC5Q9NZA1 410 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 USTQ9Y2C2 406 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 PATJQ8NI35 1801 aa18.37■□□□□ 0.53
IGHV3-52-201ENST00000519770 GRID2IPA4D2P6 1211 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 DPYSL4O14531 572 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 IGFBP4P22692 258 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 CDC25CP30307 473 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 CASQ1P31415 396 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 PTPN9P43378 593 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 SULT1E1P49888 294 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 ETF1P62495 437 aaKnown RBP18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 SLC25A52Q3SY17 297 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 ODF2Q5BJF6 829 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 DNTTIP2Q5QJE6 756 aaKnown RBP18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 EDEM1Q92611 657 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 MRPS31Q92665 395 aaKnown RBP18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 PIWIL1Q96J94 861 aaKnown RBP18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 SLC2A13Q96QE2 648 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 SFXN1Q9H9B4 322 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 JRKLQ9Y4A0 524 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 CAPN6Q9Y6Q1 641 aa18.36■□□□□ 0.53
IGHV3-52-201ENST00000519770 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 F9P00740 461 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 TNNT1P13805 278 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 HMGA1P17096 107 aaKnown RBP18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 FLT3P36888 993 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 ATP11AP98196 1134 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 CDO1Q16878 200 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 TCEAL5Q5H9L2 206 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 HECTD3Q5T447 861 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 ZFYVE27Q5T4F4 411 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 SLC35F6Q8N357 371 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 UBL4BQ8N7F7 174 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 NIPA2Q8N8Q9 360 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 CFAP57Q96MR6 1250 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 CORO1BQ9BR76 489 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 IRX2Q9BZI1 471 aaPredicted RBP18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 PRKD2Q9BZL6 878 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 NAALADL1Q9UQQ1 740 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 ALG6Q9Y672 507 aa18.35■□□□□ 0.53
IGHV3-52-201ENST00000519770 CCDC195A0A1B0GUA6 201 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 MIF4GDA9UHW6 222 aaKnown RBP18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 M0QYT0 321 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 POU2F2P09086 479 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 MYL4P12829 197 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 RARGP13631 454 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 COMTP21964 271 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 RPS6KA1Q15418 735 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 ARHGAP15Q53QZ3 475 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 C10orf120Q5SQS8 335 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 CC2D1AQ6P1N0 951 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 NYAP1Q6ZVC0 841 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 HFE2Q6ZVN8 426 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 PDZD4Q76G19 769 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 STRADAQ7RTN6 431 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 EFHBQ8N7U6 833 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 FAM172AQ8WUF8 416 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 ZNF592Q92610 1267 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 RNF34Q969K3 372 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 DNAI1Q9UI46 699 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 PLXNA3P51805 1871 aa18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 COL4A4P53420 1690 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-52-201ENST00000519770 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.53
IGHV3-52-201ENST00000519770 ZNF197O14709 1029 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 PRPSAP2O60256 369 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 RFPL2O75678 378 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 FTCDO95954 541 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 GABRR2P28476 465 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 ATP5C1P36542 298 aaKnown RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 KPNA1P52294 538 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 DEUP1Q05D60 604 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 GRIN2CQ14957 1233 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 CCDC14Q49A88 953 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SCYL2Q6P3W7 929 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SCD5Q86SK9 330 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 RHOT1Q8IXI2 618 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 LRRC57Q8N9N7 239 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 SERPINB11Q96P15 392 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 NAPGQ99747 312 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 TTYH1Q9H313 450 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 ATXN3LQ9H3M9 355 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 NMUR1Q9HB89 426 aa18.33■□□□□ 0.52
IGHV3-52-201ENST00000519770 DDIT4Q9NX09 232 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms