RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 MBD3L2Q8NHZ7 208 aaPredicted RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 ADAMTS18Q8TE60 1221 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 PARD3BQ8TEW8 1205 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 ZDHHC12Q96GR4 267 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 VPS50Q96JG6 964 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 CCDC17Q96LX7 622 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 HS6ST2Q96MM7 605 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 FYTTD1Q96QD9 318 aaKnown RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 PDGFCQ9NRA1 345 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 MYO1AQ9UBC5 1043 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 A0A1W2PPC4 97 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 WDR91A4D1P6 747 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CLCA1A8K7I4 914 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 A8MVJ9 347 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 PPP6CO00743 305 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 ADAMTS3O15072 1205 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CA12O43570 354 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 NCK2O43639 380 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 PRC1O43663 620 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 TUBB4AP04350 444 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 NBPF7P0C2Y1 421 aaPredicted RBP4.41□□□□□ -1.7
SKP1-205ENST00000519054 TMEM225BP0DP42 221 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CDK4P11802 303 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 MYL4P12829 197 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 KELP23276 732 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 ADRA1DP25100 572 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CERS1P27544 350 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 HTR7P34969 479 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 GPS1Q13098 491 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 FHL3Q13643 280 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 PMS2P11Q13670 270 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CLCA4Q14CN2 919 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 LONRF1Q17RB8 773 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 MTX3Q5HYI7 312 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 IL31Q6EBC2 164 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 SLC18B1Q6NT16 456 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 HIBCHQ6NVY1 386 aaPredicted RBP4.41□□□□□ -1.7
SKP1-205ENST00000519054 BEND5Q7L4P6 421 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 P3H2Q8IVL5 708 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 CCDC150Q8NCX0 1101 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 COLEC11Q9BWP8 271 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 SEMA4CQ9C0C4 833 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 USP29Q9HBJ7 922 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 STARD7Q9NQZ5 370 aa4.41□□□□□ -1.7
SKP1-205ENST00000519054 COL15A1P39059 1388 aa4.4□□□□□ -1.7
SKP1-205ENST00000519054 ANO9A1A5B4 782 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 BTBD19C9JJ37 291 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 TMEM232C9JQI7 657 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 COQ9O75208 318 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 WDR47O94967 919 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 NDST3O95803 873 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 ARP10275 920 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 HARSP12081 509 aaKnown RBP4.4□□□□□ -1.71
SKP1-205ENST00000519054 TNFSF4P23510 183 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 ARHGAP25P42331 645 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 TBX4P57082 545 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 TXNL4AP83876 142 aaKnown RBP4.4□□□□□ -1.71
SKP1-205ENST00000519054 LARS2Q15031 903 aaKnown RBP4.4□□□□□ -1.71
SKP1-205ENST00000519054 ARL13BQ3SXY8 428 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 FAM209BQ5JX69 171 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 FAXCQ5TGI0 409 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 ZNF626Q68DY1 528 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 GRHL2Q6ISB3 625 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 MIS18BP1Q6P0N0 1132 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 DCDC5Q6ZRR9 648 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 NEK8Q86SG6 692 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 CNGA4Q8IV77 575 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 TXLNBQ8N3L3 684 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 LINC01465Q8N7H1 131 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 PNPLA1Q8N8W4 532 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 ZC3H10Q96K80 434 aaKnown RBP4.4□□□□□ -1.71
SKP1-205ENST00000519054 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 EFHD1Q9BUP0 239 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 ZBTB26Q9HCK0 441 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 NRIP3Q9NQ35 241 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 KLHL13Q9P2N7 655 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 MAN2B2Q9Y2E5 1009 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 COL3A1P02461 1466 aaPredicted RBP4.4□□□□□ -1.71
SKP1-205ENST00000519054 WDR17Q8IZU2 1322 aa4.4□□□□□ -1.71
SKP1-205ENST00000519054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 CCNT2O60583 730 aaKnown RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 PRAMEF2O60811 474 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 MYL1P05976 194 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 LMO1P25800 156 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 PBX1P40424 430 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 NEK3P51956 506 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 GPC5P78333 572 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 CFHR3Q02985 330 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 MTAPQ13126 283 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 KCNB1Q14721 858 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 RAP1GAP2Q684P5 730 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 ABLIM2Q6H8Q1 611 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 SLC2A7Q6PXP3 512 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms