RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HAPLN3Q96S86 360 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 DUSP22Q9NRW4 184 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 DACT1Q9NYF0 836 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 DLL3Q9NYJ7 618 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 CCNL1Q9UK58 526 aaPredicted RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 SALL3Q9BXA9 1300 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 QSOX1O00391 747 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TMPRSS11DO60235 418 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 RAMP2O60895 175 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CBFA2T3O75081 653 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 WDR47O94967 919 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 VNN1O95497 513 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TMEM225BP0DP42 221 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 JUPP14923 745 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CREB1P16220 341 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CYP2C18P33260 490 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CHKAP35790 457 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 ALDH18A1P54886 795 aaKnown RBP5.23□□□□□ -1.57
SQLE-202ENST00000518604 INHBCP55103 352 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 EIF4A1P60842 406 aaKnown RBP5.23□□□□□ -1.57
SQLE-202ENST00000518604 DPTQ07507 201 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CYP1B1Q16678 543 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 ANO1Q5XXA6 986 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 ZNF804AQ7Z570 1209 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 METTL25Q8N6Q8 603 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 ATG16L2Q8NAA4 619 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CAGE1Q8TC20 777 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 WDR60Q8WVS4 1066 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TRAPPC12Q8WVT3 735 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 OVCA2Q8WZ82 227 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 CCT6BQ92526 530 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TBC1D5Q92609 795 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TTPALQ9BTX7 342 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 KATNAL1Q9BW62 490 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 FSD1LQ9BXM9 530 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
SQLE-202ENST00000518604 PPCSQ9HAB8 311 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 HERC5Q9UII4 1024 aaKnown RBP5.23□□□□□ -1.57
SQLE-202ENST00000518604 AMFRQ9UKV5 643 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 FER1L4A9Z1Z3 1794 aa5.23□□□□□ -1.57
SQLE-202ENST00000518604 A0A087X1B8 175 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 AQP12BA6NM10 295 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 LINC00473A8K010 186 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 DHHO43323 396 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 ANXA6P08133 673 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 ITGA2BP08514 1039 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 NPSP0C0P6 89 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 CTGFP29279 349 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 CXCR5P32302 372 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 HALP42357 657 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 CCT8P50990 548 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 EEFSECP57772 596 aaKnown RBP5.22□□□□□ -1.57
SQLE-202ENST00000518604 SIM1P81133 766 aaPredicted RBP5.22□□□□□ -1.57
SQLE-202ENST00000518604 MTAPQ13126 283 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 TUBB8Q3ZCM7 444 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 FAM153CQ494X1 144 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 INO80DQ53TQ3 878 aaPredicted RBP5.22□□□□□ -1.57
SQLE-202ENST00000518604 TANGO2Q6ICL3 276 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 PTCHD4Q6ZW05 846 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 LDLRAD3Q86YD5 345 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 SFTPA1Q8IWL2 248 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 C11orf44Q8N8P7 122 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 STYXQ8WUJ0 223 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 PRR25Q96S07 402 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 TIMP4Q99727 224 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 THAP7Q9BT49 309 aaPredicted RBP5.22□□□□□ -1.57
SQLE-202ENST00000518604 PAGR1Q9BTK6 254 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 MYLK2Q9H1R3 596 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 SNX15Q9NRS6 342 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 LRFN1Q9P244 771 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 SLC17A6Q9P2U8 582 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 MGAT4CQ9UBM8 478 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 NFU1Q9UMS0 254 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 ADAMTS5Q9UNA0 930 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 ENTPD2Q9Y5L3 495 aa5.22□□□□□ -1.57
SQLE-202ENST00000518604 PNMA6EA0A0J9YXQ4 647 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 ACKR2O00590 384 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 PCDH17O14917 1159 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 SPRY2O43597 315 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 ASNA1O43681 348 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 NBNO60934 754 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 EBLN1P0CF75 366 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 WT1P19544 449 aaPredicted RBP5.21□□□□□ -1.58
SQLE-202ENST00000518604 ADRA1DP25100 572 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 CACNA2D1P54289 1103 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 E2F1Q01094 437 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 FHL2Q14192 279 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 CSHL1Q14406 222 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 KCNJ12Q14500 433 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 RINLQ6ZS11 566 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 CLASRPQ8N2M8 674 aaKnown RBP5.21□□□□□ -1.58
SQLE-202ENST00000518604 MYCT1Q8N699 235 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.21□□□□□ -1.58
SQLE-202ENST00000518604 ANKRD42Q8N9B4 389 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 WDYHV1Q96HA8 205 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 ISCA1Q9BUE6 129 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 MAGEH1Q9H213 219 aa5.21□□□□□ -1.58
SQLE-202ENST00000518604 MORC2Q9Y6X9 1032 aaPredicted RBP5.21□□□□□ -1.58
SQLE-202ENST00000518604 H0YIZ8 118 aa5.2□□□□□ -1.58
SQLE-202ENST00000518604 J3KTA2 159 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms