RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TMEM25Q86YD3 366 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 B3GALNT2Q8NCR0 500 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 OR5B17Q8NGF7 314 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 OR6B3Q8NGW1 331 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 BAHD1Q8TBE0 780 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 UBL7Q96S82 380 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 ACOX2Q99424 681 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 KIF2CQ99661 725 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZNF518BQ9C0D4 1074 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 PCIF1Q9H4Z3 704 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 GAREM1Q9H706 876 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.462e-8■■■■■ 350
TRAPPC9-203ENST00000517667 TM7SF3Q9NS93 570 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 WDR35Q9P2L0 1181 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 PCDHGB2Q9Y5G2 931 aa12.15□□□□□ -0.46
TRAPPC9-203ENST00000517667 MYH10P35580 1976 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 NPC1O15118 1278 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TRIM24O15164 1050 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 BCAT2O15382 392 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 CILPO75339 1184 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 DKK1O94907 266 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 NCAM1P13591 858 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TYRP14679 529 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 MAOBP27338 520 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 OXTRP30559 389 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TNNC1P63316 161 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 GRIN1Q05586 938 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 SUZ12Q15022 739 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 HTR3DQ70Z44 454 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 RHBDD1Q8TEB9 315 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 DNAJC19Q96DA6 116 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TOE1Q96GM8 510 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 BBS2Q9BXC9 721 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 CCSER2Q9H7U1 834 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 KIAA1586Q9HCI6 787 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 TOR4AQ9NXH8 423 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 CACNA2D2Q9NY47 1150 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 MARK1Q9P0L2 795 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 LSM7Q9UK45 103 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 RAD54BQ9Y620 910 aa12.14□□□□□ -0.47
TRAPPC9-203ENST00000517667 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 FAM92AA1XBS5 289 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 A8MXQ7 604 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 PRRT4C9JH25 899 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 E9PAM4 449 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 TK2O00142 265 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 ZDHHC11BP0C7U3 371 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 IRF1P10914 325 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 TXLNAP40222 546 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 DGKGP49619 791 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 CASP5P51878 434 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 SLC5A3P53794 718 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 CYP4F3Q08477 520 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 E2F5Q15329 346 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 WDR72Q3MJ13 1102 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 DBX2Q6ZNG2 339 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 TRAPPC11Q7Z392 1133 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 PDCD7Q8N8D1 485 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 ADAM32Q8TC27 787 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 GPR174Q9BXC1 333 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 MIR1-1HGQ9H1L0 117 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 SLC6A17Q9H1V8 727 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 WSB2Q9NYS7 404 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 USP36Q9P275 1121 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 CHORDC1Q9UHD1 332 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 BPTFQ12830 3046 aa12.13□□□□□ -0.47
TRAPPC9-203ENST00000517667 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 TRABD2BA6NFA1 517 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 TLR5O60602 858 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 IDEP14735 1019 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 GJB2P29033 226 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 ABCG1P45844 678 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 SF3A1Q15459 793 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 HLA-BQ31612 363 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 FUT11Q495W5 492 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 DCAF12L1Q5VU92 463 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 RRAGBQ5VZM2 374 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 SCAMP5Q8TAC9 235 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 TNIP3Q96KP6 325 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms