RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 PCDHGB5Q9Y5G0 923 aa6.28□□□□□ -1.4
CTNNA1-202ENST00000517533 OTOL1A6NHN0 477 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 GRXCR1A8MXD5 290 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 H3BNC9 293 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 MYO1CO00159 1063 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 KIAA0355O15063 1070 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 IPO13O94829 963 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 SUN1O94901 812 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 PGM3O95394 542 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ACSL1P33121 698 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 TNNT3P45378 269 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 SCNN1GP51170 649 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 COPAP53621 1224 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 POLE2P56282 527 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 WNT3P56703 355 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 BPIFB3P59826 476 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 LILRA4P59901 499 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 SCARB2Q14108 478 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 EIF4A2Q14240 407 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 WTAPQ15007 396 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 UBXN11Q5T124 520 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ARL6IP4Q66PJ3 421 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ATG16L1Q676U5 607 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 PLAG1Q6DJT9 500 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 LCNL1Q6ZST4 164 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 RHOT2Q8IXI1 618 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 OR56A1Q8NGH5 318 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 OR6Y1Q8NGX8 325 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 POC1BQ8TC44 478 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 JAKMIP1Q96N16 626 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 TRIB1Q96RU8 372 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 MNTQ99583 582 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 REEP2Q9BRK0 252 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ITPAQ9BY32 194 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 CHODLQ9H9P2 273 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 XPNPEP3Q9NQH7 507 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ABCF3Q9NUQ8 709 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 ARGLU1Q9NWB6 273 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 DNMT3BQ9UBC3 853 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 DKK4Q9UBT3 224 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 MRPS17Q9Y2R5 130 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 CHST2Q9Y4C5 530 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 USP15Q9Y4E8 981 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 PIAS3Q9Y6X2 628 aa6.27□□□□□ -1.41
CTNNA1-202ENST00000517533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 NPEPPSL1A6NEC2 478 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 MFAP3LO75121 409 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 ERAL1O75616 437 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 KRT38O76015 456 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 ACADMP11310 421 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 PECAM1P16284 738 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 BMP7P18075 431 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 EGR1P18146 543 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 FGFR4P22455 802 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 TGM1P22735 817 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 MLH1P40692 756 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 PTDSS1P48651 473 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 BCAT1P54687 386 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 JAG1P78504 1218 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 HSD11B2P80365 405 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 CREB5Q02930 508 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 OCA2Q04671 838 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 SCAPQ12770 1279 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 ACVR2BQ13705 512 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 SLC29A2Q14542 456 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 PTCHD3Q3KNS1 767 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 AMOTQ4VCS5 1084 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 PDCD4Q53EL6 469 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 NAIF1Q69YI7 327 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 H1FNTQ75WM6 255 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 ANKS1BQ7Z6G8 1248 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 YAF2Q8IY57 180 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 GALNT4Q8N4A0 578 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 TMEM57Q8N5G2 664 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 CPT1CQ8TCG5 803 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 ATP2A3Q93084 1043 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 MIEF2Q96C03 454 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 SDCCAG3Q96C92 435 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 TBC1D31Q96DN5 1066 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 MYCBPQ99417 103 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 GPATCH1Q9BRR8 931 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 EPS8L2Q9H6S3 715 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 GRPEL1Q9HAV7 217 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 EIF2B3Q9NR50 452 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 SEPT11Q9NVA2 429 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 DAPP1Q9UN19 280 aa6.26□□□□□ -1.41
CTNNA1-202ENST00000517533 A0A1B0GTW7 788 aa6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 C17orf113A0A1B0GUU1 675 aa6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 LOC102723971A0A1B0GUV8 181 aa6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 PCDH17O14917 1159 aa6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 RRP9O43818 475 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 PLATP00750 562 aa6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-202ENST00000517533 IDEP14735 1019 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms