RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GOLGA8SH3BPF8 625 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 MDM4O15151 490 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 COCHO43405 550 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 IGLV3-25P01717 112 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 LTFP02788 710 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CYP1A2P05177 515 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CALB1P05937 261 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 RARGP13631 454 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 FSHRP23945 695 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CDC25CP30307 473 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 FLT3P36888 993 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 SCNN1AP37088 669 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 MTHFRP42898 656 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 RPL7AP62424 266 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 OGDHQ02218 1023 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ZNF252P-AS1Q0IIN9 211 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CCDC173Q0VFZ6 552 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 MAMLD1Q13495 774 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 EIF4EBP2Q13542 120 aaPredicted RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 TAF12Q16514 161 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ATAT1Q5SQI0 421 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CES5AQ6NT32 575 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 BEND5Q7L4P6 421 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 BNIPLQ7Z465 357 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 DEFB106AQ8N104 65 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 EMC1Q8N766 993 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 LEMD2Q8NC56 503 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 C3orf20Q8ND61 904 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 PDZD8Q8NEN9 1154 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 EDEM1Q92611 657 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 FGF13Q92913 245 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 LRRC3BQ96PB8 259 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 SLITRK1Q96PX8 696 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CYP2S1Q96SQ9 504 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 DESI2Q9BSY9 194 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ATXN3LQ9H3M9 355 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 METTL5Q9NRN9 209 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 ASNSD1Q9NWL6 643 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 CLIC5Q9NZA1 410 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 SALL4Q9UJQ4 1053 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 NAALADL1Q9UQQ1 740 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 MRPS23Q9Y3D9 190 aaKnown RBP10.36□□□□□ -0.75
CLN8-202ENST00000517514 TRIOO75962 3097 aa10.36□□□□□ -0.75
CLN8-202ENST00000517514 ANKRD62A6NC57 917 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 C2CD4BA6NLJ0 364 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 SIGLEC16A6NMB1 481 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 TLR5O60602 858 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 DAB1O75553 588 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 PRAMEF12O95522 483 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 GLI1P08151 1106 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 IL9P15248 144 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ABCB4P21439 1286 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 FCARP24071 287 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 RFC1P35251 1148 aaPredicted RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 YWHAZP63104 245 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 SMAD2Q15796 467 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 GPR158Q5T848 1215 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 FAM102AQ5T9C2 384 aaPredicted RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 MSANTD2Q6P1R3 559 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 ARCQ7LC44 396 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 VPS36Q86VN1 386 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ZDHHC17Q8IUH5 632 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 MAB21L3Q8N8X9 362 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ST13P5Q8NFI4 369 aaPredicted RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 NT5C3BQ969T7 300 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ZNF653Q96CK0 615 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 RIPOR3Q96MK2 946 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 DDX23Q9BUQ8 820 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 LACRTQ9GZZ8 138 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 SMG9Q9H0W8 520 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 DEF6Q9H4E7 631 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 TASP1Q9H6P5 420 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 TLR8Q9NR97 1041 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 EHD2Q9NZN4 543 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 WDR35Q9P2L0 1181 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 MYO1AQ9UBC5 1043 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
CLN8-202ENST00000517514 PCDHA13Q9Y5I0 950 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 COL4A2P08572 1712 aa10.35□□□□□ -0.75
CLN8-202ENST00000517514 MYO10Q9HD67 2058 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 TMEM191CA6NGB0 347 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 GOLGA6L6A8MZA4 724 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 ZNF197O14709 1029 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 ARHGAP6O43182 974 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 GREM1O60565 184 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 HSF2BPO75031 334 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 FGF19O95750 216 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 H2AFZP0C0S5 128 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 TMEM253P0C7T8 217 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
CLN8-202ENST00000517514 MAGEA1P43355 309 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms