RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 INPP5AQ14642 412 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 STXBP2Q15833 593 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GPR141Q7Z602 305 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CPNE8Q86YQ8 564 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 LPAR1Q92633 364 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 DLG3Q92796 817 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 HDAC11Q96DB2 347 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 PGBD4Q96DM1 585 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CNPY3Q9BT09 278 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 APPL1Q9UKG1 709 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 AP4S1Q9Y587 144 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 SYNJ2BP-COX16A0A087WUM0 186 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 TMEM191CA6NGB0 347 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 SDR42E2A6NKP2 422 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 LYPLA2O95372 231 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 NR3C2P08235 984 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ETS2P15036 469 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 RAP1GDS1P52306 607 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 NR1H2P55055 460 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 ACTR3P61158 418 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 FOLH1Q04609 750 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 NAB1Q13506 487 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 APOBEC3HQ6NTF7 200 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 WDR49Q8IV35 697 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 SLC7A6OSQ96CW6 309 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 BTBD9Q96Q07 612 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 GPR88Q9GZN0 384 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 COX16Q9P0S2 106 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 PLLPQ9Y342 182 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 COQ4Q9Y3A0 265 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 CHD4Q14839 1912 aa6.89□□□□□ -1.31
CPNE3-203ENST00000517490 BAZ2AQ9UIF9 1905 aaKnown RBP6.89□□□□□ -1.31
CPNE3-203ENST00000517490 MYH7BA7E2Y1 1941 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 AKAP11Q9UKA4 1901 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 IGLV3-22A0A075B6J6 115 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 A0A0B4J269 797 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRR5-ARHGAP8B1AHC4 643 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SLCO1B7G3V0H7 640 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRKCBP05771 671 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CETPP11597 493 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ACAT1P24752 427 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TPP2P29144 1249 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SERPINB5P36952 375 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 NAMPTP43490 491 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ARHGAP8P85298 464 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRKG1Q13976 671 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 RBM44Q6ZP01 1051 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 BTN2A1Q7KYR7 527 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 LPCAT2Q7L5N7 544 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ACER1Q8TDN7 264 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 WDR60Q8WVS4 1066 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 LENG9Q96B70 501 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TAAR1Q96RJ0 339 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 IDI2Q9BXS1 227 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 IPO11Q9UI26 975 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ITGA11Q9UKX5 1188 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SPATA31A5Q5VU36 1347 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 SPATA31A7Q8IWB4 1347 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ADAMTS7Q9UKP4 1686 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 BHMG1C9JSJ3 638 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 E9PBE3 544 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 KLHL41O60662 606 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PGM3O95394 542 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CYP1A1P04798 512 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 C6orf222P0C671 652 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 UNGP13051 313 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 VCLP18206 1134 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 AMPD1P23109 780 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PRAMEP78395 509 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ENPEPQ07075 957 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CDC16Q13042 620 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 STX5Q13190 355 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 UBAP2LQ14157 1087 aaKnown RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ZACNQ401N2 412 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CCDC153Q494R4 210 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ITPRIPL1Q6GPH6 555 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ZCCHC23Q6ZST2 131 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 C7orf31Q8N865 590 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DDHD1Q8NEL9 900 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 ACMSDQ8TDX5 336 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 CPT1BQ92523 772 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 GRIP2Q9C0E4 1043 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TCF7L2Q9NQB0 619 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 NSMCE4AQ9NXX6 385 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 PKD2L2Q9NZM6 624 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 USP21Q9UK80 565 aa6.88□□□□□ -1.31
CPNE3-203ENST00000517490 TRPC5Q9UL62 973 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 MAGED2Q9UNF1 606 aaPredicted RBP6.88□□□□□ -1.31
CPNE3-203ENST00000517490 DMTF1Q9Y222 760 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms