RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 ATP8A1Q9Y2Q0 1164 aa0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMA7Q9Y2S6 64 aaKnown RBP0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MED16Q9Y2X0 877 aa0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 INSL5Q9Y5Q6 135 aa0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CDY1Q9Y6F8 540 aa0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NOTCH2Q04721 2471 aa0.67□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TRBV5-3A0A0A0MS03 114 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TLDC2A0PJX2 215 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 A6NNC1 897 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C16orf96A6NNT2 1141 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRSS47A8MTI9 375 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 H0YGN5 161 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 H7C4K7 107 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FOXN3O00409 490 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 EXOC5O00471 708 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 BTN3A1O00481 513 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CD3EAPO15446 510 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RGS10O43665 173 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TLX3O43711 291 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RRP9O43818 475 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMPRSS11DO60235 418 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 UGDHO60701 494 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DDNO94850 711 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PAPSS2O95340 614 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IL33O95760 270 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 POU2F2P09086 479 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ACAA1P09110 424 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MYBP10242 640 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KITP10721 976 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CYP2C9P11712 490 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ST6GAL1P15907 406 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RHCEP18577 417 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CDK11BP21127 795 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RPS6KB1P23443 525 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CCND1P24385 295 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 EPHA3P29320 983 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TACR3P29371 465 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HOXA7P31268 230 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRKAR1BP31321 381 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 UQCRC1P31930 480 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GALNSP34059 522 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IL6STP40189 918 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RECQLP46063 649 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PTDSS1P48651 473 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ALDH7A1P49419 539 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ENTPD1P49961 510 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GAS1P54826 345 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TIRAPP58753 221 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRTAP10-12P60413 245 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WDR5P61964 334 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RAB1AP62820 205 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GPC5P78333 572 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT85P78386 507 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RAE1P78406 368 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HSF1Q00613 529 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TIAL1Q01085 375 aaKnown RBP eCLIP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CFHR3Q02985 330 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LTBQ06643 244 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC13A2Q13183 592 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 STK3Q13188 491 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MTA1Q13330 715 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CTBP1Q13363 440 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CCNIQ14094 377 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KEAP1Q14145 624 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF267Q14586 743 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PFKFB3Q16875 520 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT71Q3SY84 523 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 INO80DQ53TQ3 878 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM76BQ5HYJ3 339 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C9orf50Q5SZB4 431 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 OTUD3Q5T2D3 398 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LMBRD2Q68DH5 695 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NADSYN1Q6IA69 706 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZDHHC24Q6UX98 284 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF783Q6ZMS7 281 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM57BQ71RH2 274 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NPM2Q86SE8 214 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SPATA2LQ8IUW3 424 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GRAMD1CQ8IYS0 662 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRR18Q8N4B5 295 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 OR56A3Q8NH54 315 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PPP1R35Q8TAP8 253 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NUDCD2Q8WVJ2 157 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MAML1Q92585 1016 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PIGKQ92643 395 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 EME1Q96AY2 570 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MSI2Q96DH6 328 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RSPRY1Q96DX4 576 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MVB12AQ96EY5 273 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WBP1Q96G27 269 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KAZALD1Q96I82 304 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HIC2Q96JB3 615 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CDK5RAP3Q96JB5 506 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM84BQ96KN1 310 aaPredicted RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PUS7Q96PZ0 661 aaKnown RBP0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CGRRF1Q99675 332 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MEIS3Q99687 375 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 VN1R3Q9BXE9 311 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC13A1Q9BZW2 595 aa0.66□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ARHGAP39Q9C0H5 1083 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms