RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DHX36Q9H2U1 1008 aaKnown RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FAM83DQ9H4H8 585 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 C1orf112Q9NSG2 853 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TMEM184CQ9NVA4 438 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 GAR1Q9NY12 217 aaKnown RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ITGB1BP2Q9UKP3 347 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SQORQ9Y6N5 450 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CD8B2A6NJW9 211 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 A8MVJ9 347 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PRPF3O43395 683 aaKnown RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TLR2O60603 784 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MAP4K4O95819 1239 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PARP1P09874 1014 aaKnown RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CYP19A1P11511 503 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ADRA1DP25100 572 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ACVR2AP27037 513 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CCKBRP32239 447 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HTRA4P83105 476 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 GPR162Q16538 588 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TRIM71Q2Q1W2 868 aaKnown RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SLC9C1Q4G0N8 1177 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ARHGAP29Q52LW3 1261 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 C3orf38Q5JPI3 329 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RUSC1-AS1Q66K80 236 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MZT2AQ6P582 158 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 DEF8Q6ZN54 512 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LINC01465Q8N7H1 131 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 C11orf44Q8N8P7 122 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PNPLA1Q8N8W4 532 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HIC2Q96JB3 615 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 VCPIP1Q96JH7 1222 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TRMOQ9BU70 441 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CINPQ9BW66 212 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 BRIP1Q9BX63 1249 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZNF287Q9HBT7 754 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ARL8BQ9NVJ2 186 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 WWOXQ9NZC7 414 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MID2Q9UJV3 735 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 NOB1Q9ULX3 412 aaKnown RBP3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 L1RE1Q9UN81 338 aa3.42□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LY6G6EA0A0G2JKS1 128 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FYB1O15117 783 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FRS3O43559 492 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MGEA5O60502 916 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TULP3O75386 442 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CTSAP10619 480 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CCKARP32238 428 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CPA2P48052 419 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RPS16P62249 146 aaKnown RBP3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CCDC15Q0P6D6 951 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 NPY5RQ15761 445 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KLHL22Q53GT1 634 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LVRNQ6Q4G3 990 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 APOA5Q6Q788 366 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CLEC9AQ6UXN8 241 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CCDC149Q6ZUS6 474 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SKAP1Q86WV1 359 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 COL23A1Q86Y22 540 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 P3H2Q8IVL5 708 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KIAA0319LQ8IZA0 1049 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SDR16C5Q8N3Y7 309 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ARFGAP1Q8N6T3 406 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZFYVE19Q96K21 471 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ADGRE3Q9BY15 652 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 NUAK2Q9H093 628 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 STK32BQ9NY57 414 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HEY2Q9UBP5 337 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CNTNAP2Q9UHC6 1331 aa3.41□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CRYABP02511 175 aaKnown RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TMEM225BP0DP42 221 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TXNP10599 105 aaKnown RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 EIF4A1P60842 406 aaKnown RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FMO1Q01740 532 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC14A1Q13336 389 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 POLD3Q15054 466 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MIDNQ504T8 468 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ODR4Q5SWX8 454 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RNF220Q5VTB9 566 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DAB2IPQ5VWQ8 1189 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DARS2Q6PI48 645 aaKnown RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CRELD2Q6UXH1 353 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 COLCA1Q6ZS62 124 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 UBE2Q1Q7Z7E8 422 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FSTL5Q8N475 847 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MPLKIPQ8TAP9 179 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 STAG1Q8WVM7 1258 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 LRTOMTQ8WZ04 291 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RUNDC1Q96C34 613 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CHST8Q9H2A9 424 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DNAJB11Q9UBS4 358 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZNF580Q9UK33 172 aa3.4□□□□□ -1.87
RNU6-1088P-201ENST00000516850 B4DGG1 531 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 INPPL1O15357 1258 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SYF2O95926 243 aaKnown RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PSG1P11464 419 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MYF5P13349 255 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ATF7P17544 494 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 BTF3P20290 206 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms