RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 AMFRQ9UKV5 643 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 CELA1Q9UNI1 258 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 R3HCC1Q9Y3T6 440 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 COL5A2P05997 1499 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 KLLNB2CW77 178 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 F8W810 466 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 TULP2O00295 520 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CLIC1O00299 241 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 OPA1O60313 960 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 ENDOD1O94919 500 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 GLUD1P00367 558 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 LCATP04180 440 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 JMJD7P0C870 316 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 NR1D1P20393 614 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 ADORA2AP29274 412 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 IGFALSP35858 605 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CDKN1AP38936 164 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 IARSP41252 1262 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 GLUD2P49448 558 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 DIO1P49895 249 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 HSD17B4P51659 736 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 HK3P52790 923 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 GAD2Q05329 585 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 HDAC1Q13547 482 aaPredicted RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 HABP2Q14520 560 aaPredicted RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 TERF2Q15554 542 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 UGT8Q16880 541 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 MTERF2Q49AM1 385 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 MUM1L1Q5H9M0 696 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 PIK3CD-AS1Q5SR53 167 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CDCA2Q69YH5 1023 aaPredicted RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 RGS7BPQ6MZT1 257 aaPredicted RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 MTHFD1LQ6UB35 978 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 TFAP2DQ7Z6R9 452 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CHPFQ8IZ52 775 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 FGFRL1Q8N441 504 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 LINC01465Q8N7H1 131 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF248Q8NDW4 579 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 DEPTORQ8TB45 409 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 SOCS4Q8WXH5 440 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 DPF2Q92785 391 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CD101Q93033 1021 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 CYFIP2Q96F07 1278 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 IL17FQ96PD4 163 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 UNKQ9C0B0 810 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 MOV10Q9HCE1 1003 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 AGO4Q9HCK5 861 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 IFT57Q9NWB7 429 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 AGO2Q9UKV8 859 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZDHHC8Q9ULC8 765 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 WBP11Q9Y2W2 641 aaKnown RBP0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 RNF215Q9Y6U7 377 aa0.28□□□□□ -2.36
RNU6-557P-201ENST00000516842 COL16A1Q07092 1604 aaPredicted RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 ATRXP46100 2492 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 KLHL33A6NCF5 533 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CCDC85CA6NKD9 419 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 hCG_1984214I3L0E3 225 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 P2RY10O00398 339 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 DCLK1O15075 740 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 KLF4O43474 513 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 KCNQ2O43526 872 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 SPRY3O43610 288 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 SOAT2O75908 522 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CRYAAP02489 173 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 AFPP02771 609 aaKnown RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CYP1A2P05177 515 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 HOXD3P31249 432 aaPredicted RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TIMP3P35625 211 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PHKA1P46020 1223 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CLK1P49759 484 aaKnown RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TARDBPQ13148 414 aaKnown RBP eCLIP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CAPRIN1Q14444 709 aaKnown RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 MFSD13AQ14CX5 517 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PLCB4Q15147 1175 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 ATP2B3Q16720 1220 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 FAM110CQ1W6H9 321 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TCTEX1D4Q5JR98 221 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TCTE1Q5JU00 501 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 VSTM1Q6UX27 236 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 GDPD4Q6W3E5 623 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 FRMD7Q6ZUT3 714 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PNMA8AQ86V59 439 aaPredicted RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 FJX1Q86VR8 437 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PASD1Q8IV76 773 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 ADGRF4Q8IZF3 695 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 SIRT6Q8N6T7 355 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 RUNDC1Q96C34 613 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TMX3Q96JJ7 454 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 CLUHP3Q96NS8 147 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 FCRL5Q96RD9 977 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 VGLL1Q99990 258 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 ZNF518BQ9C0D4 1074 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 TTYH3Q9C0H2 523 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 NUAK2Q9H093 628 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 WDR13Q9H1Z4 485 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PDZD7Q9H5P4 517 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 PAPOLBQ9NRJ5 636 aaKnown RBP0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 SPTLC3Q9NUV7 552 aa0.27□□□□□ -2.37
RNU6-557P-201ENST00000516842 DNAJB11Q9UBS4 358 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms